Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLIC4Q9Y696 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.57■■□□□ 1.84
CLIC4Q9Y696 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CLIC4Q9Y696 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.57■■□□□ 1.84
CLIC4Q9Y696 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLIC4Q9Y696 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CLIC4Q9Y696 LONRF2P2-201ENST00000439212 571 ntBASIC26.56■■□□□ 1.84
CLIC4Q9Y696 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CLIC4Q9Y696 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CLIC4Q9Y696 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.55■■□□□ 1.84
CLIC4Q9Y696 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
CLIC4Q9Y696 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CLIC4Q9Y696 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.55■■□□□ 1.84
CLIC4Q9Y696 AC090877.2-201ENST00000558441 1738 ntBASIC26.55■■□□□ 1.84
CLIC4Q9Y696 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.55■■□□□ 1.84
CLIC4Q9Y696 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLIC4Q9Y696 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLIC4Q9Y696 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
CLIC4Q9Y696 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.55■■□□□ 1.84
CLIC4Q9Y696 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLIC4Q9Y696 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLIC4Q9Y696 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.54■■□□□ 1.84
CLIC4Q9Y696 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CLIC4Q9Y696 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
CLIC4Q9Y696 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLIC4Q9Y696 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CLIC4Q9Y696 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLIC4Q9Y696 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CLIC4Q9Y696 ABHD17AP5-201ENST00000580133 923 ntBASIC26.53■■□□□ 1.84
CLIC4Q9Y696 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.53■■□□□ 1.84
CLIC4Q9Y696 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CLIC4Q9Y696 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.53■■□□□ 1.84
CLIC4Q9Y696 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CLIC4Q9Y696 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CLIC4Q9Y696 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.52■■□□□ 1.84
CLIC4Q9Y696 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
CLIC4Q9Y696 AL592295.1-201ENST00000400984 884 ntBASIC26.52■■□□□ 1.84
CLIC4Q9Y696 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.52■■□□□ 1.84
CLIC4Q9Y696 DUX4L18-201ENST00000553347 1267 ntBASIC26.52■■□□□ 1.84
CLIC4Q9Y696 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.52■■□□□ 1.84
CLIC4Q9Y696 NTF6A-201ENST00000591175 560 ntBASIC26.51■■□□□ 1.83
CLIC4Q9Y696 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CLIC4Q9Y696 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CLIC4Q9Y696 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLIC4Q9Y696 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLIC4Q9Y696 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLIC4Q9Y696 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLIC4Q9Y696 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLIC4Q9Y696 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLIC4Q9Y696 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CLIC4Q9Y696 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CLIC4Q9Y696 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CLIC4Q9Y696 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CLIC4Q9Y696 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
CLIC4Q9Y696 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CLIC4Q9Y696 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.49■■□□□ 1.83
CLIC4Q9Y696 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CLIC4Q9Y696 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CLIC4Q9Y696 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CLIC4Q9Y696 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
CLIC4Q9Y696 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.48■■□□□ 1.83
CLIC4Q9Y696 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CLIC4Q9Y696 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CLIC4Q9Y696 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CLIC4Q9Y696 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CLIC4Q9Y696 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.48■■□□□ 1.83
CLIC4Q9Y696 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
CLIC4Q9Y696 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CLIC4Q9Y696 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
CLIC4Q9Y696 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.47■■□□□ 1.83
CLIC4Q9Y696 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLIC4Q9Y696 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLIC4Q9Y696 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.47■■□□□ 1.83
CLIC4Q9Y696 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CLIC4Q9Y696 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CLIC4Q9Y696 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CLIC4Q9Y696 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CLIC4Q9Y696 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CLIC4Q9Y696 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CLIC4Q9Y696 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CLIC4Q9Y696 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.45■■□□□ 1.82
CLIC4Q9Y696 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.45■■□□□ 1.82
CLIC4Q9Y696 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CLIC4Q9Y696 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CLIC4Q9Y696 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CLIC4Q9Y696 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
CLIC4Q9Y696 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CLIC4Q9Y696 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
CLIC4Q9Y696 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CLIC4Q9Y696 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CLIC4Q9Y696 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CLIC4Q9Y696 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CLIC4Q9Y696 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.44■■□□□ 1.82
CLIC4Q9Y696 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.44■■□□□ 1.82
CLIC4Q9Y696 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.44■■□□□ 1.82
CLIC4Q9Y696 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.44■■□□□ 1.82
CLIC4Q9Y696 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CLIC4Q9Y696 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CLIC4Q9Y696 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
CLIC4Q9Y696 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms