Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LSM2Q9Y333 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LSM2Q9Y333 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LSM2Q9Y333 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LSM2Q9Y333 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LSM2Q9Y333 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSM2Q9Y333 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSM2Q9Y333 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSM2Q9Y333 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSM2Q9Y333 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LSM2Q9Y333 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LSM2Q9Y333 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LSM2Q9Y333 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSM2Q9Y333 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LSM2Q9Y333 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSM2Q9Y333 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSM2Q9Y333 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSM2Q9Y333 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LSM2Q9Y333 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LSM2Q9Y333 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.68■□□□□ 0.9
LSM2Q9Y333 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LSM2Q9Y333 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
LSM2Q9Y333 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LSM2Q9Y333 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
LSM2Q9Y333 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
LSM2Q9Y333 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSM2Q9Y333 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSM2Q9Y333 AC126177.7-201ENST00000547904 679 ntBASIC20.67■□□□□ 0.9
LSM2Q9Y333 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LSM2Q9Y333 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSM2Q9Y333 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.67■□□□□ 0.9
LSM2Q9Y333 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LSM2Q9Y333 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSM2Q9Y333 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.67■□□□□ 0.9
LSM2Q9Y333 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LSM2Q9Y333 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.66■□□□□ 0.9
LSM2Q9Y333 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
LSM2Q9Y333 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.66■□□□□ 0.9
LSM2Q9Y333 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LSM2Q9Y333 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.66■□□□□ 0.9
LSM2Q9Y333 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LSM2Q9Y333 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LSM2Q9Y333 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LSM2Q9Y333 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.65■□□□□ 0.9
LSM2Q9Y333 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LSM2Q9Y333 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
LSM2Q9Y333 DUX4L11-201ENST00000611504 1267 ntBASIC20.65■□□□□ 0.9
LSM2Q9Y333 DUX4L12-201ENST00000614593 1267 ntBASIC20.65■□□□□ 0.9
LSM2Q9Y333 DUX4L14-201ENST00000621227 1267 ntBASIC20.65■□□□□ 0.9
LSM2Q9Y333 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LSM2Q9Y333 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
LSM2Q9Y333 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
LSM2Q9Y333 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LSM2Q9Y333 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.64■□□□□ 0.89
LSM2Q9Y333 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LSM2Q9Y333 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
LSM2Q9Y333 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LSM2Q9Y333 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LSM2Q9Y333 ANOS2P-203ENST00000472227 1816 ntBASIC20.64■□□□□ 0.89
LSM2Q9Y333 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.63■□□□□ 0.89
LSM2Q9Y333 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSM2Q9Y333 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.63■□□□□ 0.89
LSM2Q9Y333 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSM2Q9Y333 DUSP8P3-201ENST00000399571 1760 ntBASIC20.63■□□□□ 0.89
LSM2Q9Y333 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSM2Q9Y333 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSM2Q9Y333 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LSM2Q9Y333 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LSM2Q9Y333 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSM2Q9Y333 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.62■□□□□ 0.89
LSM2Q9Y333 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LSM2Q9Y333 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.62■□□□□ 0.89
LSM2Q9Y333 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LSM2Q9Y333 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LSM2Q9Y333 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
LSM2Q9Y333 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.61■□□□□ 0.89
LSM2Q9Y333 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LSM2Q9Y333 C1orf229-201ENST00000623686 2258 ntBASIC20.61■□□□□ 0.89
LSM2Q9Y333 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LSM2Q9Y333 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LSM2Q9Y333 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LSM2Q9Y333 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LSM2Q9Y333 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LSM2Q9Y333 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LSM2Q9Y333 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.61■□□□□ 0.89
LSM2Q9Y333 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LSM2Q9Y333 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LSM2Q9Y333 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
LSM2Q9Y333 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.61■□□□□ 0.89
LSM2Q9Y333 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LSM2Q9Y333 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LSM2Q9Y333 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.6■□□□□ 0.89
LSM2Q9Y333 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LSM2Q9Y333 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.6■□□□□ 0.89
LSM2Q9Y333 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LSM2Q9Y333 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LSM2Q9Y333 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LSM2Q9Y333 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
LSM2Q9Y333 LINC00526-201ENST00000581067 1875 ntBASIC20.6■□□□□ 0.89
LSM2Q9Y333 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms