Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 LINC01468-202ENST00000435813 975 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 AL512637.1-201ENST00000439523 1231 ntBASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 HYI-AS1-201ENST00000444386 545 ntTSL 2 BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 AP000542.1-201ENST00000448473 371 ntBASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 MTND5P13-201ENST00000513046 1079 ntBASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 RNU5A-4P-201ENST00000516588 111 ntBASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 MTCO1P47-201ENST00000523889 1271 ntBASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 ADI1P3-201ENST00000549509 470 ntBASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 AC234775.3-201ENST00000564612 656 ntBASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 AC067959.1-201ENST00000604334 379 ntBASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 AC064872.1-201ENST00000604823 1072 ntBASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 AC016575.1-201ENST00000607026 382 ntBASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 AP005131.7-201ENST00000610087 611 ntBASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 AC084824.3-201ENST00000620472 856 ntBASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 AC009501.3-201ENST00000605001 1352 ntBASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP4-4Q9BYR3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 CCNT2P1-201ENST00000423082 1315 ntBASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 RNF148-201ENST00000434824 1304 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 MTCO1P4-201ENST00000520516 1409 ntBASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 AL645634.1-201ENST00000418426 462 ntTSL 3 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 UBE2V1P6-201ENST00000430840 422 ntBASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 AL512661.1-201ENST00000434586 1253 ntBASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 HACL1-206ENST00000435217 1269 ntTSL 2 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 MED6P1-201ENST00000439659 713 ntBASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 PGM5P4-AS1-204ENST00000450636 537 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 AC104685.1-201ENST00000502445 371 ntBASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 MTCYBP44-201ENST00000514835 823 ntBASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 AC012038.1-201ENST00000551279 552 ntTSL 4 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 UBE2DNL-204ENST00000602536 740 ntBASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 AC114878.2-201ENST00000604863 1251 ntBASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 AC013562.2-201ENST00000611632 603 ntBASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 AL035425.4-201ENST00000624509 1063 ntBASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 AL358781.1-202ENST00000321081 1360 ntBASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 TRIM64FP-201ENST00000427305 1371 ntBASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 LMO3-224ENST00000540848 1574 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRTAP4-4Q9BYR3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
KRTAP4-4Q9BYR3 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KRTAP4-4Q9BYR3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KRTAP4-4Q9BYR3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KRTAP4-4Q9BYR3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
KRTAP4-4Q9BYR3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KRTAP4-4Q9BYR3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KRTAP4-4Q9BYR3 AMTN-201ENST00000339336 1037 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
KRTAP4-4Q9BYR3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KRTAP4-4Q9BYR3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KRTAP4-4Q9BYR3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.71□□□□□ -1.66
KRTAP4-4Q9BYR3 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC4.71□□□□□ -1.66
KRTAP4-4Q9BYR3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.71□□□□□ -1.66
KRTAP4-4Q9BYR3 AL009172.1-201ENST00000436365 1098 ntBASIC4.71□□□□□ -1.66
KRTAP4-4Q9BYR3 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.71□□□□□ -1.66
KRTAP4-4Q9BYR3 AL512326.1-201ENST00000443050 721 ntBASIC4.71□□□□□ -1.66
KRTAP4-4Q9BYR3 MTATP6P26-201ENST00000445926 662 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms