Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LIMD2Q9BT23 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LIMD2Q9BT23 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LIMD2Q9BT23 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC13.69□□□□□ -0.22
LIMD2Q9BT23 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LIMD2Q9BT23 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LIMD2Q9BT23 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LIMD2Q9BT23 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIMD2Q9BT23 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIMD2Q9BT23 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIMD2Q9BT23 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LIMD2Q9BT23 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIMD2Q9BT23 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIMD2Q9BT23 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIMD2Q9BT23 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
LIMD2Q9BT23 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC13.68□□□□□ -0.22
LIMD2Q9BT23 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LIMD2Q9BT23 RAP2CP1-202ENST00000605179 643 ntBASIC13.68□□□□□ -0.22
LIMD2Q9BT23 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIMD2Q9BT23 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC13.68□□□□□ -0.22
LIMD2Q9BT23 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LIMD2Q9BT23 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC13.68□□□□□ -0.22
LIMD2Q9BT23 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC13.67□□□□□ -0.22
LIMD2Q9BT23 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC13.67□□□□□ -0.22
LIMD2Q9BT23 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIMD2Q9BT23 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LIMD2Q9BT23 AC026202.3-201ENST00000600805 1127 ntBASIC13.67□□□□□ -0.22
LIMD2Q9BT23 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIMD2Q9BT23 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIMD2Q9BT23 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC13.67□□□□□ -0.22
LIMD2Q9BT23 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIMD2Q9BT23 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LIMD2Q9BT23 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LIMD2Q9BT23 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIMD2Q9BT23 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIMD2Q9BT23 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LIMD2Q9BT23 TMEM202-AS1-202ENST00000565181 2325 ntBASIC13.67□□□□□ -0.22
LIMD2Q9BT23 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC13.67□□□□□ -0.22
LIMD2Q9BT23 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
LIMD2Q9BT23 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
LIMD2Q9BT23 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIMD2Q9BT23 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
LIMD2Q9BT23 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIMD2Q9BT23 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIMD2Q9BT23 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIMD2Q9BT23 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LIMD2Q9BT23 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LIMD2Q9BT23 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC13.66□□□□□ -0.22
LIMD2Q9BT23 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
LIMD2Q9BT23 AC133552.2-201ENST00000619106 1032 ntBASIC13.66□□□□□ -0.22
LIMD2Q9BT23 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIMD2Q9BT23 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LIMD2Q9BT23 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIMD2Q9BT23 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIMD2Q9BT23 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LIMD2Q9BT23 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIMD2Q9BT23 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIMD2Q9BT23 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIMD2Q9BT23 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LIMD2Q9BT23 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LIMD2Q9BT23 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LIMD2Q9BT23 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC13.65□□□□□ -0.22
LIMD2Q9BT23 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LIMD2Q9BT23 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
LIMD2Q9BT23 AC018755.3-202ENST00000596210 929 ntBASIC13.65□□□□□ -0.22
LIMD2Q9BT23 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIMD2Q9BT23 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
LIMD2Q9BT23 AP003733.4-201ENST00000623785 1697 ntBASIC13.65□□□□□ -0.22
LIMD2Q9BT23 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIMD2Q9BT23 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIMD2Q9BT23 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIMD2Q9BT23 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIMD2Q9BT23 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIMD2Q9BT23 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIMD2Q9BT23 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LIMD2Q9BT23 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIMD2Q9BT23 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIMD2Q9BT23 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC13.64□□□□□ -0.23
LIMD2Q9BT23 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC13.64□□□□□ -0.23
LIMD2Q9BT23 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIMD2Q9BT23 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LIMD2Q9BT23 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIMD2Q9BT23 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LIMD2Q9BT23 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIMD2Q9BT23 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIMD2Q9BT23 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIMD2Q9BT23 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIMD2Q9BT23 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIMD2Q9BT23 RARRES2P2-201ENST00000394842 485 ntBASIC13.63□□□□□ -0.23
LIMD2Q9BT23 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIMD2Q9BT23 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIMD2Q9BT23 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIMD2Q9BT23 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC13.63□□□□□ -0.23
LIMD2Q9BT23 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LIMD2Q9BT23 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LIMD2Q9BT23 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC13.63□□□□□ -0.23
LIMD2Q9BT23 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LIMD2Q9BT23 AC009831.1-201ENST00000580420 1582 ntBASIC13.62□□□□□ -0.23
LIMD2Q9BT23 AC022211.4-201ENST00000625094 2161 ntBASIC13.62□□□□□ -0.23
LIMD2Q9BT23 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms