Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.19■□□□□ 0.82
SDHCQ99643 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SDHCQ99643 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SDHCQ99643 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SDHCQ99643 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SDHCQ99643 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.18■□□□□ 0.82
SDHCQ99643 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
SDHCQ99643 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SDHCQ99643 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SDHCQ99643 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SDHCQ99643 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.18■□□□□ 0.82
SDHCQ99643 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SDHCQ99643 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.18■□□□□ 0.82
SDHCQ99643 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SDHCQ99643 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SDHCQ99643 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.17■□□□□ 0.82
SDHCQ99643 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SDHCQ99643 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SDHCQ99643 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SDHCQ99643 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SDHCQ99643 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SDHCQ99643 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
SDHCQ99643 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SDHCQ99643 RARRES2P7-201ENST00000567349 469 ntBASIC20.16■□□□□ 0.82
SDHCQ99643 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SDHCQ99643 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHCQ99643 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHCQ99643 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHCQ99643 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.15■□□□□ 0.82
SDHCQ99643 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SDHCQ99643 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHCQ99643 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.14■□□□□ 0.82
SDHCQ99643 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SDHCQ99643 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SDHCQ99643 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SDHCQ99643 HLA-L-211ENST00000482052 1765 ntBASIC20.14■□□□□ 0.81
SDHCQ99643 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
SDHCQ99643 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.14■□□□□ 0.81
SDHCQ99643 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SDHCQ99643 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.14■□□□□ 0.81
SDHCQ99643 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SDHCQ99643 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SDHCQ99643 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.14■□□□□ 0.81
SDHCQ99643 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.14■□□□□ 0.81
SDHCQ99643 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SDHCQ99643 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SDHCQ99643 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SDHCQ99643 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHCQ99643 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.13■□□□□ 0.81
SDHCQ99643 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHCQ99643 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SDHCQ99643 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SDHCQ99643 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHCQ99643 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SDHCQ99643 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SDHCQ99643 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.12■□□□□ 0.81
SDHCQ99643 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SDHCQ99643 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.12■□□□□ 0.81
SDHCQ99643 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SDHCQ99643 ANOS2P-203ENST00000472227 1816 ntBASIC20.12■□□□□ 0.81
SDHCQ99643 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHCQ99643 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SDHCQ99643 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.12■□□□□ 0.81
SDHCQ99643 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.12■□□□□ 0.81
SDHCQ99643 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SDHCQ99643 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SDHCQ99643 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHCQ99643 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SDHCQ99643 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SDHCQ99643 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.11■□□□□ 0.81
SDHCQ99643 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SDHCQ99643 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SDHCQ99643 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SDHCQ99643 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.11■□□□□ 0.81
SDHCQ99643 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SDHCQ99643 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SDHCQ99643 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SDHCQ99643 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SDHCQ99643 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SDHCQ99643 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SDHCQ99643 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SDHCQ99643 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SDHCQ99643 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SDHCQ99643 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
SDHCQ99643 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SDHCQ99643 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
SDHCQ99643 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SDHCQ99643 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SDHCQ99643 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SDHCQ99643 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
SDHCQ99643 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SDHCQ99643 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
SDHCQ99643 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SDHCQ99643 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SDHCQ99643 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.09■□□□□ 0.81
SDHCQ99643 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.08■□□□□ 0.81
SDHCQ99643 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SDHCQ99643 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SDHCQ99643 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SDHCQ99643 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms