Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 AP004833.2-201ENST00000532228 1454 ntBASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 AL355802.2-201ENST00000402069 882 ntBASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 AC093827.2-201ENST00000512654 315 ntBASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 MIR6722-201ENST00000617286 78 ntBASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
CNTNAP3BQ96NU0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CNTNAP3BQ96NU0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CNTNAP3BQ96NU0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CNTNAP3BQ96NU0 AF131216.4-201ENST00000638924 1588 ntBASIC22.29■■□□□ 1.16
CNTNAP3BQ96NU0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CNTNAP3BQ96NU0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
CNTNAP3BQ96NU0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CNTNAP3BQ96NU0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.29■■□□□ 1.16
CNTNAP3BQ96NU0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.29■■□□□ 1.16
CNTNAP3BQ96NU0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.29■■□□□ 1.16
CNTNAP3BQ96NU0 SERBP1P1-201ENST00000396021 1160 ntBASIC22.29■■□□□ 1.16
CNTNAP3BQ96NU0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CNTNAP3BQ96NU0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.29■■□□□ 1.16
CNTNAP3BQ96NU0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.29■■□□□ 1.16
CNTNAP3BQ96NU0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.29■■□□□ 1.16
CNTNAP3BQ96NU0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CNTNAP3BQ96NU0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.28■■□□□ 1.16
CNTNAP3BQ96NU0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CNTNAP3BQ96NU0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CNTNAP3BQ96NU0 CD99P1-205ENST00000527459 561 ntBASIC22.28■■□□□ 1.16
CNTNAP3BQ96NU0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.28■■□□□ 1.16
CNTNAP3BQ96NU0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CNTNAP3BQ96NU0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CNTNAP3BQ96NU0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNTNAP3BQ96NU0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNTNAP3BQ96NU0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNTNAP3BQ96NU0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNTNAP3BQ96NU0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.27■■□□□ 1.16
CNTNAP3BQ96NU0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.27■■□□□ 1.16
CNTNAP3BQ96NU0 AC092171.4-201ENST00000609130 632 ntBASIC22.27■■□□□ 1.16
CNTNAP3BQ96NU0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CNTNAP3BQ96NU0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNTNAP3BQ96NU0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNTNAP3BQ96NU0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.26■■□□□ 1.15
CNTNAP3BQ96NU0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CNTNAP3BQ96NU0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.26■■□□□ 1.15
CNTNAP3BQ96NU0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.26■■□□□ 1.15
CNTNAP3BQ96NU0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNTNAP3BQ96NU0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
CNTNAP3BQ96NU0 AC080038.1-201ENST00000611274 1154 ntBASIC22.26■■□□□ 1.15
CNTNAP3BQ96NU0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CNTNAP3BQ96NU0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.25■■□□□ 1.15
CNTNAP3BQ96NU0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CNTNAP3BQ96NU0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.25■■□□□ 1.15
CNTNAP3BQ96NU0 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.25■■□□□ 1.15
CNTNAP3BQ96NU0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.25■■□□□ 1.15
CNTNAP3BQ96NU0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CNTNAP3BQ96NU0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CNTNAP3BQ96NU0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
CNTNAP3BQ96NU0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CNTNAP3BQ96NU0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CNTNAP3BQ96NU0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNTNAP3BQ96NU0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNTNAP3BQ96NU0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.24■■□□□ 1.15
CNTNAP3BQ96NU0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.24■■□□□ 1.15
CNTNAP3BQ96NU0 NTF6G-201ENST00000591094 616 ntBASIC22.24■■□□□ 1.15
CNTNAP3BQ96NU0 SNX5-217ENST00000606557 1087 ntBASIC22.24■■□□□ 1.15
CNTNAP3BQ96NU0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CNTNAP3BQ96NU0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNTNAP3BQ96NU0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNTNAP3BQ96NU0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.23■■□□□ 1.15
CNTNAP3BQ96NU0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNTNAP3BQ96NU0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNTNAP3BQ96NU0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNTNAP3BQ96NU0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.22■■□□□ 1.15
CNTNAP3BQ96NU0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.22■■□□□ 1.15
CNTNAP3BQ96NU0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.22■■□□□ 1.15
CNTNAP3BQ96NU0 AC245100.8-202ENST00000629247 1058 ntBASIC22.22■■□□□ 1.15
CNTNAP3BQ96NU0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CNTNAP3BQ96NU0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CNTNAP3BQ96NU0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.21■■□□□ 1.15
CNTNAP3BQ96NU0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.21■■□□□ 1.15
CNTNAP3BQ96NU0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CNTNAP3BQ96NU0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CNTNAP3BQ96NU0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.2■■□□□ 1.14
CNTNAP3BQ96NU0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CNTNAP3BQ96NU0 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.2■■□□□ 1.14
CNTNAP3BQ96NU0 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.2■■□□□ 1.14
CNTNAP3BQ96NU0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.2■■□□□ 1.14
CNTNAP3BQ96NU0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.2■■□□□ 1.14
CNTNAP3BQ96NU0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CNTNAP3BQ96NU0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms