Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
SYNE2Q8WXH0 AC211429.1-201ENST00000415277 523 ntBASIC9.76□□□□□ -0.85
SYNE2Q8WXH0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SYNE2Q8WXH0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SYNE2Q8WXH0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SYNE2Q8WXH0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC9.76□□□□□ -0.85
SYNE2Q8WXH0 AC245100.8-202ENST00000629247 1058 ntBASIC9.76□□□□□ -0.85
SYNE2Q8WXH0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC9.76□□□□□ -0.85
SYNE2Q8WXH0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC9.76□□□□□ -0.85
SYNE2Q8WXH0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC9.76□□□□□ -0.85
SYNE2Q8WXH0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC9.76□□□□□ -0.85
SYNE2Q8WXH0 AL138781.1-201ENST00000566567 1274 ntBASIC9.76□□□□□ -0.85
SYNE2Q8WXH0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
SYNE2Q8WXH0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SYNE2Q8WXH0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SYNE2Q8WXH0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SYNE2Q8WXH0 AL359504.2-201ENST00000605506 1601 ntBASIC9.76□□□□□ -0.85
SYNE2Q8WXH0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 AC069152.1-201ENST00000438030 544 ntBASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 TERF1P2-201ENST00000583350 1212 ntBASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 AL121906.2-201ENST00000621597 723 ntBASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC9.75□□□□□ -0.85
SYNE2Q8WXH0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 BID-214ENST00000617586 542 ntTSL 5 BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 PPP1R14BP3-201ENST00000509033 445 ntBASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC9.74□□□□□ -0.85
SYNE2Q8WXH0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 GPX1P1-201ENST00000388829 606 ntBASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 NME4-202ENST00000382940 766 ntTSL 3 BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 TSPY26P-201ENST00000476365 1326 ntBASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 PTCHD3P2-201ENST00000424937 1205 ntBASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC9.73□□□□□ -0.85
SYNE2Q8WXH0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
SYNE2Q8WXH0 AC005703.6-201ENST00000623265 1329 ntBASIC9.72□□□□□ -0.85
SYNE2Q8WXH0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC9.72□□□□□ -0.85
SYNE2Q8WXH0 KRT18P14-201ENST00000534205 1250 ntBASIC9.72□□□□□ -0.85
SYNE2Q8WXH0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYNE2Q8WXH0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC9.72□□□□□ -0.85
SYNE2Q8WXH0 AF131216.4-201ENST00000638924 1588 ntBASIC9.72□□□□□ -0.85
SYNE2Q8WXH0 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC9.72□□□□□ -0.85
SYNE2Q8WXH0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYNE2Q8WXH0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC9.72□□□□□ -0.85
SYNE2Q8WXH0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC9.72□□□□□ -0.85
SYNE2Q8WXH0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC9.72□□□□□ -0.85
SYNE2Q8WXH0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYNE2Q8WXH0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SYNE2Q8WXH0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC9.71□□□□□ -0.85
SYNE2Q8WXH0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC9.71□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms