Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMIM4Q8WVI0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMIM4Q8WVI0 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.85■□□□□ 0.77
SMIM4Q8WVI0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMIM4Q8WVI0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
SMIM4Q8WVI0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.85■□□□□ 0.77
SMIM4Q8WVI0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMIM4Q8WVI0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMIM4Q8WVI0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.85■□□□□ 0.77
SMIM4Q8WVI0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMIM4Q8WVI0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMIM4Q8WVI0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMIM4Q8WVI0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMIM4Q8WVI0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMIM4Q8WVI0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SMIM4Q8WVI0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SMIM4Q8WVI0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMIM4Q8WVI0 AP006261.1-201ENST00000584783 668 ntBASIC19.84■□□□□ 0.77
SMIM4Q8WVI0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMIM4Q8WVI0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.84■□□□□ 0.77
SMIM4Q8WVI0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SMIM4Q8WVI0 AC127496.7-201ENST00000625110 1798 ntBASIC19.84■□□□□ 0.77
SMIM4Q8WVI0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMIM4Q8WVI0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMIM4Q8WVI0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.84■□□□□ 0.77
SMIM4Q8WVI0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMIM4Q8WVI0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.84■□□□□ 0.77
SMIM4Q8WVI0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMIM4Q8WVI0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMIM4Q8WVI0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMIM4Q8WVI0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SMIM4Q8WVI0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMIM4Q8WVI0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SMIM4Q8WVI0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.83■□□□□ 0.77
SMIM4Q8WVI0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMIM4Q8WVI0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMIM4Q8WVI0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SMIM4Q8WVI0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMIM4Q8WVI0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SMIM4Q8WVI0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SMIM4Q8WVI0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMIM4Q8WVI0 AC137767.1-201ENST00000602918 1920 ntBASIC19.82■□□□□ 0.76
SMIM4Q8WVI0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM4Q8WVI0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.82■□□□□ 0.76
SMIM4Q8WVI0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.82■□□□□ 0.76
SMIM4Q8WVI0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.82■□□□□ 0.76
SMIM4Q8WVI0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM4Q8WVI0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM4Q8WVI0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.81■□□□□ 0.76
SMIM4Q8WVI0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMIM4Q8WVI0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SMIM4Q8WVI0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMIM4Q8WVI0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
SMIM4Q8WVI0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMIM4Q8WVI0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.81■□□□□ 0.76
SMIM4Q8WVI0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.81■□□□□ 0.76
SMIM4Q8WVI0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMIM4Q8WVI0 C1orf229-201ENST00000623686 2258 ntBASIC19.81■□□□□ 0.76
SMIM4Q8WVI0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM4Q8WVI0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.8■□□□□ 0.76
SMIM4Q8WVI0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM4Q8WVI0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM4Q8WVI0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM4Q8WVI0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SMIM4Q8WVI0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
SMIM4Q8WVI0 AC044849.2-201ENST00000606596 710 ntBASIC19.8■□□□□ 0.76
SMIM4Q8WVI0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.8■□□□□ 0.76
SMIM4Q8WVI0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SMIM4Q8WVI0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM4Q8WVI0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM4Q8WVI0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.79■□□□□ 0.76
SMIM4Q8WVI0 GUSBP5-202ENST00000510805 1989 ntBASIC19.79■□□□□ 0.76
SMIM4Q8WVI0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM4Q8WVI0 ANOS2P-203ENST00000472227 1816 ntBASIC19.79■□□□□ 0.76
SMIM4Q8WVI0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM4Q8WVI0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.79■□□□□ 0.76
SMIM4Q8WVI0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.79■□□□□ 0.76
SMIM4Q8WVI0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.79■□□□□ 0.76
SMIM4Q8WVI0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM4Q8WVI0 DUSP8P3-201ENST00000399571 1760 ntBASIC19.79■□□□□ 0.76
SMIM4Q8WVI0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM4Q8WVI0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.78■□□□□ 0.76
SMIM4Q8WVI0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM4Q8WVI0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM4Q8WVI0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM4Q8WVI0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM4Q8WVI0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM4Q8WVI0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM4Q8WVI0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.78■□□□□ 0.76
SMIM4Q8WVI0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM4Q8WVI0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM4Q8WVI0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SMIM4Q8WVI0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM4Q8WVI0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMIM4Q8WVI0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMIM4Q8WVI0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.77■□□□□ 0.76
SMIM4Q8WVI0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMIM4Q8WVI0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.77■□□□□ 0.76
SMIM4Q8WVI0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMIM4Q8WVI0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms