Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.72■■□□□ 1.39
SFTPA1Q8IWL2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.72■■□□□ 1.39
SFTPA1Q8IWL2 AC005837.3-201ENST00000612163 286 ntBASIC23.72■■□□□ 1.39
SFTPA1Q8IWL2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
SFTPA1Q8IWL2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.72■■□□□ 1.39
SFTPA1Q8IWL2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SFTPA1Q8IWL2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SFTPA1Q8IWL2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
SFTPA1Q8IWL2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SFTPA1Q8IWL2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SFTPA1Q8IWL2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.71■■□□□ 1.39
SFTPA1Q8IWL2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SFTPA1Q8IWL2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SFTPA1Q8IWL2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SFTPA1Q8IWL2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
SFTPA1Q8IWL2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
SFTPA1Q8IWL2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.69■■□□□ 1.38
SFTPA1Q8IWL2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
SFTPA1Q8IWL2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SFTPA1Q8IWL2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SFTPA1Q8IWL2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SFTPA1Q8IWL2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SFTPA1Q8IWL2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
SFTPA1Q8IWL2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.69■■□□□ 1.38
SFTPA1Q8IWL2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
SFTPA1Q8IWL2 SLC6A10P-202ENST00000431994 2058 ntBASIC23.69■■□□□ 1.38
SFTPA1Q8IWL2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.69■■□□□ 1.38
SFTPA1Q8IWL2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.69■■□□□ 1.38
SFTPA1Q8IWL2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SFTPA1Q8IWL2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SFTPA1Q8IWL2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.68■■□□□ 1.38
SFTPA1Q8IWL2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SFTPA1Q8IWL2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SFTPA1Q8IWL2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.68■■□□□ 1.38
SFTPA1Q8IWL2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.68■■□□□ 1.38
SFTPA1Q8IWL2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.68■■□□□ 1.38
SFTPA1Q8IWL2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SFTPA1Q8IWL2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SFTPA1Q8IWL2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SFTPA1Q8IWL2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SFTPA1Q8IWL2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SFTPA1Q8IWL2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SFTPA1Q8IWL2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
SFTPA1Q8IWL2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.66■■□□□ 1.38
SFTPA1Q8IWL2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SFTPA1Q8IWL2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.66■■□□□ 1.38
SFTPA1Q8IWL2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SFTPA1Q8IWL2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.65■■□□□ 1.38
SFTPA1Q8IWL2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.65■■□□□ 1.38
SFTPA1Q8IWL2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SFTPA1Q8IWL2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SFTPA1Q8IWL2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SFTPA1Q8IWL2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.65■■□□□ 1.38
SFTPA1Q8IWL2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SFTPA1Q8IWL2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.65■■□□□ 1.38
SFTPA1Q8IWL2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.38
SFTPA1Q8IWL2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
SFTPA1Q8IWL2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.64■■□□□ 1.38
SFTPA1Q8IWL2 AC004448.1-201ENST00000458332 883 ntBASIC23.64■■□□□ 1.37
SFTPA1Q8IWL2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.64■■□□□ 1.37
SFTPA1Q8IWL2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
SFTPA1Q8IWL2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SFTPA1Q8IWL2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.63■■□□□ 1.37
SFTPA1Q8IWL2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.63■■□□□ 1.37
SFTPA1Q8IWL2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.63■■□□□ 1.37
SFTPA1Q8IWL2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SFTPA1Q8IWL2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
SFTPA1Q8IWL2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.62■■□□□ 1.37
SFTPA1Q8IWL2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.62■■□□□ 1.37
SFTPA1Q8IWL2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SFTPA1Q8IWL2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SFTPA1Q8IWL2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SFTPA1Q8IWL2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SFTPA1Q8IWL2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SFTPA1Q8IWL2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.61■■□□□ 1.37
SFTPA1Q8IWL2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.61■■□□□ 1.37
SFTPA1Q8IWL2 PBX2P1-201ENST00000493219 1291 ntBASIC23.61■■□□□ 1.37
SFTPA1Q8IWL2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SFTPA1Q8IWL2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SFTPA1Q8IWL2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.6■■□□□ 1.37
SFTPA1Q8IWL2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.6■■□□□ 1.37
SFTPA1Q8IWL2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SFTPA1Q8IWL2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
SFTPA1Q8IWL2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SFTPA1Q8IWL2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SFTPA1Q8IWL2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SFTPA1Q8IWL2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.59■■□□□ 1.37
SFTPA1Q8IWL2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SFTPA1Q8IWL2 UNC93B3-201ENST00000308076 687 ntBASIC23.59■■□□□ 1.37
SFTPA1Q8IWL2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.59■■□□□ 1.37
SFTPA1Q8IWL2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
SFTPA1Q8IWL2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SFTPA1Q8IWL2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SFTPA1Q8IWL2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SFTPA1Q8IWL2 AC091060.1-201ENST00000623524 1766 ntBASIC23.59■■□□□ 1.37
SFTPA1Q8IWL2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.59■■□□□ 1.37
SFTPA1Q8IWL2 AC131274.2-201ENST00000580697 1507 ntBASIC23.59■■□□□ 1.37
SFTPA1Q8IWL2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SFTPA1Q8IWL2 DUSP8P4-201ENST00000399538 1761 ntBASIC23.58■■□□□ 1.37
SFTPA1Q8IWL2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms