Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LRRTM4Q86VH4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LRRTM4Q86VH4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.86■■□□□ 1.25
LRRTM4Q86VH4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LRRTM4Q86VH4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LRRTM4Q86VH4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LRRTM4Q86VH4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LRRTM4Q86VH4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LRRTM4Q86VH4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LRRTM4Q86VH4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
LRRTM4Q86VH4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.85■■□□□ 1.25
LRRTM4Q86VH4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.85■■□□□ 1.25
LRRTM4Q86VH4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LRRTM4Q86VH4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
LRRTM4Q86VH4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.84■■□□□ 1.25
LRRTM4Q86VH4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.84■■□□□ 1.25
LRRTM4Q86VH4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
LRRTM4Q86VH4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.84■■□□□ 1.25
LRRTM4Q86VH4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LRRTM4Q86VH4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.84■■□□□ 1.25
LRRTM4Q86VH4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LRRTM4Q86VH4 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.84■■□□□ 1.25
LRRTM4Q86VH4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.84■■□□□ 1.25
LRRTM4Q86VH4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LRRTM4Q86VH4 AC142381.3-201ENST00000568208 1670 ntBASIC22.84■■□□□ 1.25
LRRTM4Q86VH4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
LRRTM4Q86VH4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.83■■□□□ 1.25
LRRTM4Q86VH4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
LRRTM4Q86VH4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.83■■□□□ 1.25
LRRTM4Q86VH4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.83■■□□□ 1.25
LRRTM4Q86VH4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
LRRTM4Q86VH4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
LRRTM4Q86VH4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LRRTM4Q86VH4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
LRRTM4Q86VH4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LRRTM4Q86VH4 AP003733.4-201ENST00000623785 1697 ntBASIC22.82■■□□□ 1.24
LRRTM4Q86VH4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.82■■□□□ 1.24
LRRTM4Q86VH4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
LRRTM4Q86VH4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
LRRTM4Q86VH4 TSPY9P-201ENST00000440215 945 ntBASIC22.82■■□□□ 1.24
LRRTM4Q86VH4 TSPY11P-201ENST00000442607 1045 ntBASIC22.82■■□□□ 1.24
LRRTM4Q86VH4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
LRRTM4Q86VH4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.82■■□□□ 1.24
LRRTM4Q86VH4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LRRTM4Q86VH4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LRRTM4Q86VH4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
LRRTM4Q86VH4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
LRRTM4Q86VH4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.81■■□□□ 1.24
LRRTM4Q86VH4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.81■■□□□ 1.24
LRRTM4Q86VH4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
LRRTM4Q86VH4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LRRTM4Q86VH4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LRRTM4Q86VH4 UNC93B8-201ENST00000511903 705 ntBASIC22.8■■□□□ 1.24
LRRTM4Q86VH4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LRRTM4Q86VH4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LRRTM4Q86VH4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.8■■□□□ 1.24
LRRTM4Q86VH4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LRRTM4Q86VH4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
LRRTM4Q86VH4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
LRRTM4Q86VH4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.79■■□□□ 1.24
LRRTM4Q86VH4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.79■■□□□ 1.24
LRRTM4Q86VH4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
LRRTM4Q86VH4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.79■■□□□ 1.24
LRRTM4Q86VH4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LRRTM4Q86VH4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LRRTM4Q86VH4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
LRRTM4Q86VH4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
LRRTM4Q86VH4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
LRRTM4Q86VH4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.78■■□□□ 1.24
LRRTM4Q86VH4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.78■■□□□ 1.24
LRRTM4Q86VH4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LRRTM4Q86VH4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
LRRTM4Q86VH4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.77■■□□□ 1.24
LRRTM4Q86VH4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LRRTM4Q86VH4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
LRRTM4Q86VH4 AC138932.3-201ENST00000567634 1902 ntBASIC22.77■■□□□ 1.24
LRRTM4Q86VH4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
LRRTM4Q86VH4 KRT16P3-201ENST00000439127 1283 ntBASIC22.77■■□□□ 1.24
LRRTM4Q86VH4 AL356441.2-201ENST00000443009 864 ntBASIC22.77■■□□□ 1.24
LRRTM4Q86VH4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.77■■□□□ 1.24
LRRTM4Q86VH4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.77■■□□□ 1.24
LRRTM4Q86VH4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
LRRTM4Q86VH4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
LRRTM4Q86VH4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
LRRTM4Q86VH4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LRRTM4Q86VH4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LRRTM4Q86VH4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
LRRTM4Q86VH4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.76■■□□□ 1.23
LRRTM4Q86VH4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
LRRTM4Q86VH4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LRRTM4Q86VH4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.76■■□□□ 1.23
LRRTM4Q86VH4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.76■■□□□ 1.23
LRRTM4Q86VH4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.76■■□□□ 1.23
LRRTM4Q86VH4 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.76■■□□□ 1.23
LRRTM4Q86VH4 MTDHP2-201ENST00000601468 714 ntBASIC22.76■■□□□ 1.23
LRRTM4Q86VH4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.76■■□□□ 1.23
LRRTM4Q86VH4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
LRRTM4Q86VH4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LRRTM4Q86VH4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LRRTM4Q86VH4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms