Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 SIT4YDL047W 936 nt5.54□□□□□ -1.52
UPF3P48412 ATO3YDR384C 828 nt5.54□□□□□ -1.52
UPF3P48412 CAD1YDR423C 1230 nt5.54□□□□□ -1.52
UPF3P48412 YLR317WYLR317W 435 nt5.54□□□□□ -1.52
UPF3P48412 DSE3YOR264W 1293 nt5.54□□□□□ -1.52
UPF3P48412 ENV7YPL236C 1095 nt5.54□□□□□ -1.52
UPF3P48412 ARR1YPR199C 885 nt5.54□□□□□ -1.52
UPF3P48412 MCM6YGL201C 3054 nt5.54□□□□□ -1.52
UPF3P48412 TIP20YGL145W 2106 nt5.54□□□□□ -1.52
UPF3P48412 CTF18YMR078C 2226 nt5.54□□□□□ -1.52
UPF3P48412 SEC20YDR498C 1152 nt5.53□□□□□ -1.52
UPF3P48412 PRS2YER099C 957 nt5.53□□□□□ -1.52
UPF3P48412 YER147C-AYER147C-A 411 nt5.53□□□□□ -1.52
UPF3P48412 YKL169CYKL169C 384 nt5.53□□□□□ -1.52
UPF3P48412 YKR104WYKR104W 921 nt5.53□□□□□ -1.52
UPF3P48412 YML012C-AYML012C-A 378 nt5.53□□□□□ -1.52
UPF3P48412 GFD1YMR255W 567 nt5.53□□□□□ -1.52
UPF3P48412 UIP4YPL186C 915 nt5.53□□□□□ -1.52
UPF3P48412 ATG12YBR217W 561 nt5.53□□□□□ -1.52
UPF3P48412 YIL028WYIL028W 399 nt5.52□□□□□ -1.53
UPF3P48412 YNL143CYNL143C 393 nt5.52□□□□□ -1.53
UPF3P48412 NOP13YNL175C 1212 nt5.52□□□□□ -1.53
UPF3P48412 PDR16YNL231C 1056 nt5.52□□□□□ -1.53
UPF3P48412 RPS9AYPL081W 594 nt5.52□□□□□ -1.53
UPF3P48412 YPL102CYPL102C 303 nt5.52□□□□□ -1.53
UPF3P48412 VPS70YJR126C 2436 nt5.52□□□□□ -1.53
UPF3P48412 UBA1YKL210W 3075 nt5.51□□□□□ -1.53
UPF3P48412 TBF1YPL128C 1689 nt5.51□□□□□ -1.53
UPF3P48412 UGX2YDL169C 672 nt5.51□□□□□ -1.53
UPF3P48412 INO2YDR123C 915 nt5.51□□□□□ -1.53
UPF3P48412 YER010CYER010C 705 nt5.51□□□□□ -1.53
UPF3P48412 SIP2YGL208W 1248 nt5.51□□□□□ -1.53
UPF3P48412 YKL031WYKL031W 414 nt5.51□□□□□ -1.53
UPF3P48412 PAU17YLL025W 375 nt5.51□□□□□ -1.53
UPF3P48412 RBD2YPL246C 789 nt5.51□□□□□ -1.53
UPF3P48412 MKK2YPL140C 1521 nt5.51□□□□□ -1.53
UPF3P48412 ENT2YLR206W 1842 nt5.51□□□□□ -1.53
UPF3P48412 HSF1YGL073W 2502 nt5.5□□□□□ -1.53
UPF3P48412 VPS1YKR001C 2115 nt5.5□□□□□ -1.53
UPF3P48412 MAD2YJL030W 591 nt5.5□□□□□ -1.53
UPF3P48412 SPO7YAL009W 780 nt5.5□□□□□ -1.53
UPF3P48412 RMI1YPL024W 726 nt5.5□□□□□ -1.53
UPF3P48412 MRL1YPR079W 1146 nt5.5□□□□□ -1.53
UPF3P48412 MST1YKL194C 1389 nt5.5□□□□□ -1.53
UPF3P48412 HER2YMR293C 1395 nt5.5□□□□□ -1.53
UPF3P48412 ECM3YOR092W 1842 nt5.5□□□□□ -1.53
UPF3P48412 OMS1YDR316W 1416 nt5.49□□□□□ -1.53
UPF3P48412 GYP1YOR070C 1914 nt5.49□□□□□ -1.53
UPF3P48412 YFR034W-AYFR034W-A 288 nt5.49□□□□□ -1.53
UPF3P48412 ASK1YKL052C 879 nt5.49□□□□□ -1.53
UPF3P48412 YLR126CYLR126C 756 nt5.49□□□□□ -1.53
UPF3P48412 PPA2YMR267W 933 nt5.49□□□□□ -1.53
UPF3P48412 ISN1YOR155C 1353 nt5.49□□□□□ -1.53
UPF3P48412 PRP46YPL151C 1356 nt5.49□□□□□ -1.53
UPF3P48412 PCL10YGL134W 1302 nt5.48□□□□□ -1.53
UPF3P48412 SVF1YDR346C 1446 nt5.48□□□□□ -1.53
UPF3P48412 MAL13YGR288W 1422 nt5.48□□□□□ -1.53
UPF3P48412 AMD1YML035C 2433 nt5.48□□□□□ -1.53
UPF3P48412 UBP9YER098W 2265 nt5.48□□□□□ -1.53
UPF3P48412 HXT5YHR096C 1779 nt5.48□□□□□ -1.53
UPF3P48412 YDR445CYDR445C 408 nt5.48□□□□□ -1.53
UPF3P48412 SPO74YGL170C 1242 nt5.48□□□□□ -1.53
UPF3P48412 APS3YJL024C 585 nt5.48□□□□□ -1.53
UPF3P48412 POR1YNL055C 852 nt5.48□□□□□ -1.53
UPF3P48412 YOR289WYOR289W 756 nt5.48□□□□□ -1.53
UPF3P48412 snR3snR3 194 nt5.48□□□□□ -1.53
UPF3P48412 EPS1YIL005W 2106 nt5.48□□□□□ -1.53
UPF3P48412 TNA1YGR260W 1605 nt5.48□□□□□ -1.53
UPF3P48412 KCH1YJR054W 1494 nt5.47□□□□□ -1.53
UPF3P48412 RTN1YDR233C 888 nt5.47□□□□□ -1.53
UPF3P48412 DFM1YDR411C 1026 nt5.47□□□□□ -1.53
UPF3P48412 NTR2YKR022C 969 nt5.47□□□□□ -1.53
UPF3P48412 SPC34YKR037C 888 nt5.47□□□□□ -1.53
UPF3P48412 YKR075CYKR075C 924 nt5.47□□□□□ -1.53
UPF3P48412 SEN34YAR008W 828 nt5.47□□□□□ -1.53
UPF3P48412 AAD15YOL165C 432 nt5.47□□□□□ -1.53
UPF3P48412 VPS36YLR417W 1701 nt5.47□□□□□ -1.53
UPF3P48412 MRK1YDL079C 1506 nt5.47□□□□□ -1.53
UPF3P48412 YDL109CYDL109C 1944 nt5.46□□□□□ -1.53
UPF3P48412 TRP3YKL211C 1455 nt5.46□□□□□ -1.53
UPF3P48412 HXT7YDR342C 1713 nt5.46□□□□□ -1.54
UPF3P48412 HXT6YDR343C 1713 nt5.46□□□□□ -1.54
UPF3P48412 MAL11YGR289C 1851 nt5.46□□□□□ -1.54
UPF3P48412 CAB4YGR277C 918 nt5.46□□□□□ -1.54
UPF3P48412 YLL017WYLL017W 312 nt5.46□□□□□ -1.54
UPF3P48412 SUE1YPR151C 621 nt5.46□□□□□ -1.54
UPF3P48412 MCM4YPR019W 2802 nt5.46□□□□□ -1.54
UPF3P48412 OXP1YKL215C 3861 nt5.46□□□□□ -1.54
UPF3P48412 STL1YDR536W 1710 nt5.45□□□□□ -1.54
UPF3P48412 PCL8YPL219W 1479 nt5.45□□□□□ -1.54
UPF3P48412 NFI1YOR156C 2181 nt5.45□□□□□ -1.54
UPF3P48412 SNO4YMR322C 714 nt5.45□□□□□ -1.54
UPF3P48412 RHO2YNL090W 579 nt5.45□□□□□ -1.54
UPF3P48412 YBL081WYBL081W 1107 nt5.45□□□□□ -1.54
UPF3P48412 RPL3YOR063W 1164 nt5.45□□□□□ -1.54
UPF3P48412 HSP33YOR391C 714 nt5.45□□□□□ -1.54
UPF3P48412 HSP32YPL280W 714 nt5.45□□□□□ -1.54
UPF3P48412 RRT2YBR246W 1164 nt5.45□□□□□ -1.54
UPF3P48412 ASH1YKL185W 1767 nt5.44□□□□□ -1.54
UPF3P48412 RAD57YDR004W 1383 nt5.44□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 40.2 ms