Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 MHF2YDL160C-A 243 nt5.17□□□□□ -1.58
TDA11P38854 YHR212W-AYHR212W-A 204 nt5.17□□□□□ -1.58
TDA11P38854 SYN8YAL014C 768 nt5.17□□□□□ -1.58
TDA11P38854 YKR073CYKR073C 321 nt5.17□□□□□ -1.58
TDA11P38854 YAR061WYAR061W 204 nt5.17□□□□□ -1.58
TDA11P38854 LST8YNL006W 912 nt5.17□□□□□ -1.58
TDA11P38854 SCO1YBR037C 888 nt5.17□□□□□ -1.58
TDA11P38854 snR17bsnR17b 332 nt5.17□□□□□ -1.58
TDA11P38854 AAP1YHR047C 2571 nt5.16□□□□□ -1.58
TDA11P38854 SIF2YBR103W 1608 nt5.16□□□□□ -1.58
TDA11P38854 YCL065WYCL065W 369 nt5.16□□□□□ -1.58
TDA11P38854 YCR047W-AYCR047W-A 207 nt5.16□□□□□ -1.58
TDA11P38854 YDR396WYDR396W 501 nt5.16□□□□□ -1.58
TDA11P38854 PAN6YIL145C 930 nt5.16□□□□□ -1.58
TDA11P38854 DAL3YIR032C 588 nt5.16□□□□□ -1.58
TDA11P38854 KIP2YPL155C 2121 nt5.16□□□□□ -1.58
TDA11P38854 ARR3YPR201W 1215 nt5.16□□□□□ -1.58
TDA11P38854 PDB1YBR221C 1101 nt5.16□□□□□ -1.58
TDA11P38854 TFC7YOR110W 1308 nt5.16□□□□□ -1.58
TDA11P38854 RSC6YCR052W 1452 nt5.15□□□□□ -1.58
TDA11P38854 ADY2YCR010C 852 nt5.15□□□□□ -1.59
TDA11P38854 DCN1YLR128W 810 nt5.15□□□□□ -1.59
TDA11P38854 MRP21YBL090W 534 nt5.15□□□□□ -1.59
TDA11P38854 YNR075C-AYNR075C-A 93 nt5.15□□□□□ -1.59
TDA11P38854 ATG23YLR431C 1362 nt5.15□□□□□ -1.59
TDA11P38854 QRI1YDL103C 1434 nt5.14□□□□□ -1.59
TDA11P38854 YNL247WYNL247W 2304 nt5.14□□□□□ -1.59
TDA11P38854 HXT5YHR096C 1779 nt5.14□□□□□ -1.59
TDA11P38854 YGR125WYGR125W 3111 nt5.14□□□□□ -1.59
TDA11P38854 YDR154CYDR154C 351 nt5.14□□□□□ -1.59
TDA11P38854 YRA1YDR381W 681 nt5.14□□□□□ -1.59
TDA11P38854 YHR145CYHR145C 357 nt5.14□□□□□ -1.59
TDA11P38854 GON7YJL184W 372 nt5.14□□□□□ -1.59
TDA11P38854 RPS19BYNL302C 435 nt5.14□□□□□ -1.59
TDA11P38854 YNR048WYNR048W 1182 nt5.14□□□□□ -1.59
TDA11P38854 SET5YHR207C 1581 nt5.13□□□□□ -1.59
TDA11P38854 YER084WYER084W 387 nt5.13□□□□□ -1.59
TDA11P38854 RRP4YHR069C 1080 nt5.13□□□□□ -1.59
TDA11P38854 YIR017W-AYIR017W-A 600 nt5.13□□□□□ -1.59
TDA11P38854 MRPL36YBR122C 534 nt5.13□□□□□ -1.59
TDA11P38854 RBA50YDR527W 1320 nt5.13□□□□□ -1.59
TDA11P38854 AIM17YHL021C 1398 nt5.13□□□□□ -1.59
TDA11P38854 SEC18YBR080C 2277 nt5.12□□□□□ -1.59
TDA11P38854 PAP1YKR002W 1707 nt5.12□□□□□ -1.59
TDA11P38854 VPS72YDR485C 2388 nt5.12□□□□□ -1.59
TDA11P38854 YJL211CYJL211C 444 nt5.12□□□□□ -1.59
TDA11P38854 APN1YKL114C 1104 nt5.12□□□□□ -1.59
TDA11P38854 UBC4YBR082C 447 nt5.12□□□□□ -1.59
TDA11P38854 YPR195CYPR195C 330 nt5.12□□□□□ -1.59
TDA11P38854 KRE6YPR159W 2163 nt5.12□□□□□ -1.59
TDA11P38854 NPY1YGL067W 1155 nt5.11□□□□□ -1.59
TDA11P38854 YGL185CYGL185C 1140 nt5.11□□□□□ -1.59
TDA11P38854 GPM3YOL056W 912 nt5.11□□□□□ -1.59
TDA11P38854 CNM67YNL225C 1746 nt5.11□□□□□ -1.59
TDA11P38854 LUC7YDL087C 786 nt5.1□□□□□ -1.59
TDA11P38854 ZRT1YGL255W 1131 nt5.1□□□□□ -1.59
TDA11P38854 YJR085CYJR085C 318 nt5.1□□□□□ -1.59
TDA11P38854 YLR194CYLR194C 765 nt5.1□□□□□ -1.59
TDA11P38854 PGA3YML125C 939 nt5.1□□□□□ -1.59
TDA11P38854 ARG1YOL058W 1263 nt5.1□□□□□ -1.59
TDA11P38854 EEB1YPL095C 1371 nt5.1□□□□□ -1.59
TDA11P38854 VMA13YPR036W 1437 nt5.1□□□□□ -1.59
TDA11P38854 YOR1YGR281W 4434 nt5.09□□□□□ -1.59
TDA11P38854 SHE10YGL228W 1734 nt5.09□□□□□ -1.59
TDA11P38854 PEX29YDR479C 1665 nt5.09□□□□□ -1.59
TDA11P38854 MNT2YGL257C 1677 nt5.09□□□□□ -1.59
TDA11P38854 HXT14YNL318C 1623 nt5.09□□□□□ -1.59
TDA11P38854 ORC5YNL261W 1440 nt5.09□□□□□ -1.59
TDA11P38854 PRO2YOR323C 1371 nt5.09□□□□□ -1.59
TDA11P38854 YPT32YGL210W 669 nt5.09□□□□□ -1.59
TDA11P38854 RMR1YGL250W 726 nt5.09□□□□□ -1.59
TDA11P38854 RHO3YIL118W 696 nt5.09□□□□□ -1.59
TDA11P38854 CBT1YKL208W 816 nt5.09□□□□□ -1.59
TDA11P38854 QCR2YPR191W 1107 nt5.09□□□□□ -1.59
TDA11P38854 CDC28YBR160W 897 nt5.09□□□□□ -1.59
TDA11P38854 BRE2YLR015W 1518 nt5.08□□□□□ -1.6
TDA11P38854 ATG20YDL113C 1923 nt5.08□□□□□ -1.6
TDA11P38854 MLC1YGL106W 450 nt5.08□□□□□ -1.6
TDA11P38854 BNS1YGR230W 414 nt5.08□□□□□ -1.6
TDA11P38854 HLJ1YMR161W 675 nt5.08□□□□□ -1.6
TDA11P38854 PGM2YMR105C 1710 nt5.08□□□□□ -1.6
TDA11P38854 GEP3YOR205C 1671 nt5.08□□□□□ -1.6
TDA11P38854 SHM1YBR263W 1473 nt5.07□□□□□ -1.6
TDA11P38854 YFL064CYFL064C 525 nt5.07□□□□□ -1.6
TDA11P38854 ECT1YGR007W 972 nt5.07□□□□□ -1.6
TDA11P38854 ARP1YHR129C 1155 nt5.07□□□□□ -1.6
TDA11P38854 SLD7YOR060C 774 nt5.07□□□□□ -1.6
TDA11P38854 YPR202WYPR202W 717 nt5.07□□□□□ -1.6
TDA11P38854 ASK10YGR097W 3441 nt5.07□□□□□ -1.6
TDA11P38854 DFG5YMR238W 1377 nt5.06□□□□□ -1.6
TDA11P38854 CRT10YOL063C 2874 nt5.06□□□□□ -1.6
TDA11P38854 SNF11YDR073W 510 nt5.06□□□□□ -1.6
TDA11P38854 ADK2YER170W 678 nt5.06□□□□□ -1.6
TDA11P38854 GAT4YIR013C 366 nt5.06□□□□□ -1.6
TDA11P38854 PRP45YAL032C 1140 nt5.06□□□□□ -1.6
TDA11P38854 RPT1YKL145W 1404 nt5.06□□□□□ -1.6
TDA11P38854 ECM7YLR443W 1347 nt5.05□□□□□ -1.6
TDA11P38854 YGR176WYGR176W 348 nt5.05□□□□□ -1.6
TDA11P38854 TEF4YKL081W 1239 nt5.05□□□□□ -1.6
TDA11P38854 DAL82YNL314W 768 nt5.05□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms