Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
COL11A2P13942 AL162430.1-201ENST00000480705 870 ntBASIC28.96■■■□□ 2.23
COL11A2P13942 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL11A2P13942 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL11A2P13942 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
COL11A2P13942 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC28.95■■■□□ 2.23
COL11A2P13942 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.23
COL11A2P13942 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC28.95■■■□□ 2.23
COL11A2P13942 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
COL11A2P13942 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
COL11A2P13942 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
COL11A2P13942 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
COL11A2P13942 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
COL11A2P13942 MAG-206ENST00000597035 542 ntTSL 4 BASIC28.94■■■□□ 2.22
COL11A2P13942 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
COL11A2P13942 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.94■■■□□ 2.22
COL11A2P13942 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
COL11A2P13942 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
COL11A2P13942 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC28.94■■■□□ 2.22
COL11A2P13942 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
COL11A2P13942 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
COL11A2P13942 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
COL11A2P13942 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
COL11A2P13942 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC28.94■■■□□ 2.22
COL11A2P13942 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.94■■■□□ 2.22
COL11A2P13942 AC091305.1-201ENST00000479476 895 ntBASIC28.94■■■□□ 2.22
COL11A2P13942 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
COL11A2P13942 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
COL11A2P13942 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
COL11A2P13942 AC004448.1-201ENST00000458332 883 ntBASIC28.93■■■□□ 2.22
COL11A2P13942 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC28.93■■■□□ 2.22
COL11A2P13942 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.93■■■□□ 2.22
COL11A2P13942 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL11A2P13942 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.92■■■□□ 2.22
COL11A2P13942 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.92■■■□□ 2.22
COL11A2P13942 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
COL11A2P13942 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
COL11A2P13942 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
COL11A2P13942 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC28.91■■■□□ 2.22
COL11A2P13942 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.91■■■□□ 2.22
COL11A2P13942 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC28.91■■■□□ 2.22
COL11A2P13942 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
COL11A2P13942 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL11A2P13942 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC28.91■■■□□ 2.22
COL11A2P13942 CA15P2-201ENST00000611168 834 ntBASIC28.91■■■□□ 2.22
COL11A2P13942 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
COL11A2P13942 SERBP1P1-201ENST00000396021 1160 ntBASIC28.9■■■□□ 2.22
COL11A2P13942 DUX4L19-201ENST00000557448 1267 ntBASIC28.9■■■□□ 2.22
COL11A2P13942 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC28.9■■■□□ 2.22
COL11A2P13942 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
COL11A2P13942 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC28.89■■■□□ 2.22
COL11A2P13942 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC28.89■■■□□ 2.22
COL11A2P13942 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC28.89■■■□□ 2.22
COL11A2P13942 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
COL11A2P13942 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
COL11A2P13942 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC28.89■■■□□ 2.21
COL11A2P13942 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC28.89■■■□□ 2.21
COL11A2P13942 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC28.89■■■□□ 2.21
COL11A2P13942 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
COL11A2P13942 AC142086.6-201ENST00000621154 1765 ntBASIC28.88■■■□□ 2.21
COL11A2P13942 AC027682.1-201ENST00000562846 899 ntBASIC28.88■■■□□ 2.21
COL11A2P13942 AC131274.2-201ENST00000580697 1507 ntBASIC28.88■■■□□ 2.21
COL11A2P13942 ERN1-208ENST00000606895 2068 ntBASIC28.88■■■□□ 2.21
COL11A2P13942 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.87■■■□□ 2.21
COL11A2P13942 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.87■■■□□ 2.21
COL11A2P13942 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
COL11A2P13942 RBM38-205ENST00000440234 686 ntTSL 2 BASIC28.87■■■□□ 2.21
COL11A2P13942 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
COL11A2P13942 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
COL11A2P13942 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC28.87■■■□□ 2.21
COL11A2P13942 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
COL11A2P13942 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL11A2P13942 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC28.86■■■□□ 2.21
COL11A2P13942 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL11A2P13942 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL11A2P13942 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
COL11A2P13942 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL11A2P13942 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL11A2P13942 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
COL11A2P13942 RASA4CP-201ENST00000424092 1398 ntBASIC28.85■■■□□ 2.21
COL11A2P13942 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COL11A2P13942 AC097639.1-201ENST00000565519 1891 ntBASIC28.85■■■□□ 2.21
COL11A2P13942 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COL11A2P13942 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC28.85■■■□□ 2.21
COL11A2P13942 AC005703.6-201ENST00000623265 1329 ntBASIC28.85■■■□□ 2.21
COL11A2P13942 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
COL11A2P13942 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
COL11A2P13942 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC28.84■■■□□ 2.21
COL11A2P13942 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL11A2P13942 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
COL11A2P13942 AC011298.3-201ENST00000615796 283 ntBASIC28.83■■■□□ 2.21
COL11A2P13942 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL11A2P13942 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
COL11A2P13942 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
COL11A2P13942 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC28.82■■■□□ 2.2
COL11A2P13942 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
COL11A2P13942 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
COL11A2P13942 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.81■■■□□ 2.2
COL11A2P13942 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.81■■■□□ 2.2
COL11A2P13942 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms