Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.73■■□□□ 1.55
TBC1D4O60343 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TBC1D4O60343 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
TBC1D4O60343 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TBC1D4O60343 AL512631.2-201ENST00000604634 923 ntBASIC24.72■■□□□ 1.55
TBC1D4O60343 MIR4466-201ENST00000606121 54 ntBASIC24.72■■□□□ 1.55
TBC1D4O60343 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
TBC1D4O60343 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TBC1D4O60343 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
TBC1D4O60343 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.71■■□□□ 1.55
TBC1D4O60343 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.71■■□□□ 1.55
TBC1D4O60343 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.71■■□□□ 1.55
TBC1D4O60343 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
TBC1D4O60343 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.7■■□□□ 1.55
TBC1D4O60343 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
TBC1D4O60343 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TBC1D4O60343 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.7■■□□□ 1.54
TBC1D4O60343 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
TBC1D4O60343 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TBC1D4O60343 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.7■■□□□ 1.54
TBC1D4O60343 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
TBC1D4O60343 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.7■■□□□ 1.54
TBC1D4O60343 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.69■■□□□ 1.54
TBC1D4O60343 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TBC1D4O60343 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.69■■□□□ 1.54
TBC1D4O60343 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.69■■□□□ 1.54
TBC1D4O60343 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.69■■□□□ 1.54
TBC1D4O60343 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.69■■□□□ 1.54
TBC1D4O60343 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.68■■□□□ 1.54
TBC1D4O60343 AC145676.1-201ENST00000514988 2004 ntBASIC24.68■■□□□ 1.54
TBC1D4O60343 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TBC1D4O60343 AL136116.3-201ENST00000402907 1138 ntBASIC24.68■■□□□ 1.54
TBC1D4O60343 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TBC1D4O60343 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TBC1D4O60343 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TBC1D4O60343 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TBC1D4O60343 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.67■■□□□ 1.54
TBC1D4O60343 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.67■■□□□ 1.54
TBC1D4O60343 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TBC1D4O60343 AC004448.1-201ENST00000458332 883 ntBASIC24.67■■□□□ 1.54
TBC1D4O60343 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.67■■□□□ 1.54
TBC1D4O60343 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
TBC1D4O60343 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TBC1D4O60343 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TBC1D4O60343 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.66■■□□□ 1.54
TBC1D4O60343 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.66■■□□□ 1.54
TBC1D4O60343 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
TBC1D4O60343 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
TBC1D4O60343 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.66■■□□□ 1.54
TBC1D4O60343 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.66■■□□□ 1.54
TBC1D4O60343 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TBC1D4O60343 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TBC1D4O60343 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TBC1D4O60343 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.66■■□□□ 1.54
TBC1D4O60343 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
TBC1D4O60343 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TBC1D4O60343 MIR6089-201ENST00000616698 64 ntBASIC24.65■■□□□ 1.54
TBC1D4O60343 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.65■■□□□ 1.54
TBC1D4O60343 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
TBC1D4O60343 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.64■■□□□ 1.54
TBC1D4O60343 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.64■■□□□ 1.54
TBC1D4O60343 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.64■■□□□ 1.54
TBC1D4O60343 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TBC1D4O60343 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.54
TBC1D4O60343 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.64■■□□□ 1.54
TBC1D4O60343 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.64■■□□□ 1.54
TBC1D4O60343 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
TBC1D4O60343 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TBC1D4O60343 MIR638-201ENST00000385237 100 ntBASIC24.63■■□□□ 1.53
TBC1D4O60343 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.63■■□□□ 1.53
TBC1D4O60343 AL139246.5-201ENST00000606645 996 ntBASIC24.63■■□□□ 1.53
TBC1D4O60343 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TBC1D4O60343 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TBC1D4O60343 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.62■■□□□ 1.53
TBC1D4O60343 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TBC1D4O60343 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.62■■□□□ 1.53
TBC1D4O60343 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
TBC1D4O60343 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.62■■□□□ 1.53
TBC1D4O60343 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.61■■□□□ 1.53
TBC1D4O60343 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.61■■□□□ 1.53
TBC1D4O60343 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
TBC1D4O60343 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
TBC1D4O60343 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.61■■□□□ 1.53
TBC1D4O60343 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TBC1D4O60343 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TBC1D4O60343 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
TBC1D4O60343 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.6■■□□□ 1.53
TBC1D4O60343 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
TBC1D4O60343 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
TBC1D4O60343 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TBC1D4O60343 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TBC1D4O60343 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.6■■□□□ 1.53
TBC1D4O60343 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TBC1D4O60343 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
TBC1D4O60343 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
TBC1D4O60343 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.59■■□□□ 1.53
TBC1D4O60343 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TBC1D4O60343 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TBC1D4O60343 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.58■■□□□ 1.53
TBC1D4O60343 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms