Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CHL1O00533 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CHL1O00533 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHL1O00533 AC020928.2-201ENST00000588717 2197 ntBASIC30.16■■■□□ 2.42
CHL1O00533 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.16■■■□□ 2.42
CHL1O00533 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
CHL1O00533 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC30.16■■■□□ 2.42
CHL1O00533 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHL1O00533 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CHL1O00533 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC30.16■■■□□ 2.42
CHL1O00533 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHL1O00533 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC30.15■■■□□ 2.42
CHL1O00533 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
CHL1O00533 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
CHL1O00533 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
CHL1O00533 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHL1O00533 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CHL1O00533 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC30.14■■■□□ 2.42
CHL1O00533 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CHL1O00533 TSPY9P-201ENST00000440215 945 ntBASIC30.14■■■□□ 2.42
CHL1O00533 TSPY11P-201ENST00000442607 1045 ntBASIC30.14■■■□□ 2.42
CHL1O00533 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.14■■■□□ 2.42
CHL1O00533 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.14■■■□□ 2.42
CHL1O00533 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.14■■■□□ 2.42
CHL1O00533 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.14■■■□□ 2.42
CHL1O00533 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC30.14■■■□□ 2.41
CHL1O00533 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
CHL1O00533 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
CHL1O00533 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC30.14■■■□□ 2.41
CHL1O00533 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
CHL1O00533 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHL1O00533 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC30.13■■■□□ 2.41
CHL1O00533 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHL1O00533 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CHL1O00533 SNX5-217ENST00000606557 1087 ntBASIC30.13■■■□□ 2.41
CHL1O00533 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CHL1O00533 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC30.13■■■□□ 2.41
CHL1O00533 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CHL1O00533 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
CHL1O00533 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
CHL1O00533 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CHL1O00533 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC30.12■■■□□ 2.41
CHL1O00533 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
CHL1O00533 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
CHL1O00533 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CHL1O00533 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CHL1O00533 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.11■■■□□ 2.41
CHL1O00533 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
CHL1O00533 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC30.11■■■□□ 2.41
CHL1O00533 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC30.11■■■□□ 2.41
CHL1O00533 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CHL1O00533 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.1■■■□□ 2.41
CHL1O00533 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC30.1■■■□□ 2.41
CHL1O00533 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CHL1O00533 KRT16P3-201ENST00000439127 1283 ntBASIC30.09■■■□□ 2.41
CHL1O00533 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC30.09■■■□□ 2.41
CHL1O00533 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHL1O00533 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.09■■■□□ 2.41
CHL1O00533 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHL1O00533 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC30.08■■■□□ 2.41
CHL1O00533 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
CHL1O00533 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CHL1O00533 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC30.08■■■□□ 2.41
CHL1O00533 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CHL1O00533 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC30.08■■■□□ 2.41
CHL1O00533 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.08■■■□□ 2.41
CHL1O00533 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CHL1O00533 MED17-227ENST00000640521 2047 ntTSL 5 BASIC30.08■■■□□ 2.41
CHL1O00533 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CHL1O00533 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CHL1O00533 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC30.07■■■□□ 2.4
CHL1O00533 AC131274.2-201ENST00000580697 1507 ntBASIC30.07■■■□□ 2.4
CHL1O00533 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC30.07■■■□□ 2.4
CHL1O00533 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.07■■■□□ 2.4
CHL1O00533 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CHL1O00533 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.07■■■□□ 2.4
CHL1O00533 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CHL1O00533 AC010997.5-201ENST00000609182 354 ntBASIC30.07■■■□□ 2.4
CHL1O00533 AC138932.3-201ENST00000567634 1902 ntBASIC30.06■■■□□ 2.4
CHL1O00533 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHL1O00533 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHL1O00533 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHL1O00533 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHL1O00533 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CHL1O00533 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC30.06■■■□□ 2.4
CHL1O00533 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC30.06■■■□□ 2.4
CHL1O00533 HLA-L-211ENST00000482052 1765 ntBASIC30.05■■■□□ 2.4
CHL1O00533 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CHL1O00533 AC142381.3-201ENST00000568208 1670 ntBASIC30.05■■■□□ 2.4
CHL1O00533 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
CHL1O00533 AC004448.1-201ENST00000458332 883 ntBASIC30.05■■■□□ 2.4
CHL1O00533 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CHL1O00533 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CHL1O00533 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CHL1O00533 CLTA-206ENST00000466396 695 ntTSL 2 BASIC30.04■■■□□ 2.4
CHL1O00533 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CHL1O00533 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
CHL1O00533 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.03■■■□□ 2.4
CHL1O00533 AC131212.1-201ENST00000613771 668 ntBASIC30.03■■■□□ 2.4
CHL1O00533 MIR6722-201ENST00000617286 78 ntBASIC30.03■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms