Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC044849.2-201ENST00000606596 710 ntBASIC16.91■□□□□ 0.3
SMKR1H3BMG3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SMKR1H3BMG3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMKR1H3BMG3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMKR1H3BMG3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMKR1H3BMG3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMKR1H3BMG3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMKR1H3BMG3 DUX4L29-201ENST00000425409 679 ntBASIC16.9■□□□□ 0.3
SMKR1H3BMG3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMKR1H3BMG3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.9■□□□□ 0.3
SMKR1H3BMG3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMKR1H3BMG3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMKR1H3BMG3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC16.89■□□□□ 0.29
SMKR1H3BMG3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMKR1H3BMG3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SMKR1H3BMG3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMKR1H3BMG3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMKR1H3BMG3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SMKR1H3BMG3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.89■□□□□ 0.29
SMKR1H3BMG3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.88■□□□□ 0.29
SMKR1H3BMG3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMKR1H3BMG3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMKR1H3BMG3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMKR1H3BMG3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMKR1H3BMG3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMKR1H3BMG3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC16.88■□□□□ 0.29
SMKR1H3BMG3 MIR6089-201ENST00000616698 64 ntBASIC16.88■□□□□ 0.29
SMKR1H3BMG3 AC148477.6-201ENST00000623746 465 ntBASIC16.88■□□□□ 0.29
SMKR1H3BMG3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMKR1H3BMG3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMKR1H3BMG3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMKR1H3BMG3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMKR1H3BMG3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMKR1H3BMG3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMKR1H3BMG3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMKR1H3BMG3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMKR1H3BMG3 HLA-L-211ENST00000482052 1765 ntBASIC16.87■□□□□ 0.29
SMKR1H3BMG3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMKR1H3BMG3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SMKR1H3BMG3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.87■□□□□ 0.29
SMKR1H3BMG3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SMKR1H3BMG3 AC008813.1-201ENST00000536597 885 ntBASIC16.87■□□□□ 0.29
SMKR1H3BMG3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SMKR1H3BMG3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SMKR1H3BMG3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMKR1H3BMG3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMKR1H3BMG3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMKR1H3BMG3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMKR1H3BMG3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMKR1H3BMG3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.86■□□□□ 0.29
SMKR1H3BMG3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMKR1H3BMG3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMKR1H3BMG3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMKR1H3BMG3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMKR1H3BMG3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMKR1H3BMG3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMKR1H3BMG3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMKR1H3BMG3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.85■□□□□ 0.29
SMKR1H3BMG3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMKR1H3BMG3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMKR1H3BMG3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMKR1H3BMG3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SMKR1H3BMG3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SMKR1H3BMG3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMKR1H3BMG3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMKR1H3BMG3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMKR1H3BMG3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMKR1H3BMG3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMKR1H3BMG3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMKR1H3BMG3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMKR1H3BMG3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMKR1H3BMG3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
SMKR1H3BMG3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMKR1H3BMG3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMKR1H3BMG3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms