Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 IRS3P-201ENST00000223076 1006 ntBASIC25.64■■□□□ 1.7
TRIM43BA6NCK2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
TRIM43BA6NCK2 AC027682.1-201ENST00000562846 899 ntBASIC25.64■■□□□ 1.7
TRIM43BA6NCK2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
TRIM43BA6NCK2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM43BA6NCK2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.63■■□□□ 1.69
TRIM43BA6NCK2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM43BA6NCK2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.63■■□□□ 1.69
TRIM43BA6NCK2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM43BA6NCK2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM43BA6NCK2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.63■■□□□ 1.69
TRIM43BA6NCK2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM43BA6NCK2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM43BA6NCK2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM43BA6NCK2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM43BA6NCK2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.62■■□□□ 1.69
TRIM43BA6NCK2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.62■■□□□ 1.69
TRIM43BA6NCK2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRIM43BA6NCK2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.62■■□□□ 1.69
TRIM43BA6NCK2 AC008764.7-201ENST00000593779 1081 ntBASIC25.62■■□□□ 1.69
TRIM43BA6NCK2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.62■■□□□ 1.69
TRIM43BA6NCK2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM43BA6NCK2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM43BA6NCK2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.61■■□□□ 1.69
TRIM43BA6NCK2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.61■■□□□ 1.69
TRIM43BA6NCK2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.61■■□□□ 1.69
TRIM43BA6NCK2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM43BA6NCK2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM43BA6NCK2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM43BA6NCK2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.61■■□□□ 1.69
TRIM43BA6NCK2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM43BA6NCK2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TRIM43BA6NCK2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.6■■□□□ 1.69
TRIM43BA6NCK2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TRIM43BA6NCK2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.6■■□□□ 1.69
TRIM43BA6NCK2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.6■■□□□ 1.69
TRIM43BA6NCK2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.6■■□□□ 1.69
TRIM43BA6NCK2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.6■■□□□ 1.69
TRIM43BA6NCK2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.6■■□□□ 1.69
TRIM43BA6NCK2 AC092171.4-201ENST00000609130 632 ntBASIC25.6■■□□□ 1.69
TRIM43BA6NCK2 IKBKGP1-201ENST00000612193 1073 ntBASIC25.6■■□□□ 1.69
TRIM43BA6NCK2 AC005703.6-201ENST00000623265 1329 ntBASIC25.6■■□□□ 1.69
TRIM43BA6NCK2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM43BA6NCK2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.59■■□□□ 1.69
TRIM43BA6NCK2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM43BA6NCK2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.59■■□□□ 1.69
TRIM43BA6NCK2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TRIM43BA6NCK2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
TRIM43BA6NCK2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.58■■□□□ 1.69
TRIM43BA6NCK2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.58■■□□□ 1.69
TRIM43BA6NCK2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
TRIM43BA6NCK2 AC099791.1-201ENST00000416440 715 ntBASIC25.57■■□□□ 1.68
TRIM43BA6NCK2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM43BA6NCK2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.57■■□□□ 1.68
TRIM43BA6NCK2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
TRIM43BA6NCK2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM43BA6NCK2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM43BA6NCK2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
TRIM43BA6NCK2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
TRIM43BA6NCK2 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.56■■□□□ 1.68
TRIM43BA6NCK2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.56■■□□□ 1.68
TRIM43BA6NCK2 AC099791.2-201ENST00000605725 427 ntBASIC25.56■■□□□ 1.68
TRIM43BA6NCK2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.56■■□□□ 1.68
TRIM43BA6NCK2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
TRIM43BA6NCK2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.55■■□□□ 1.68
TRIM43BA6NCK2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.55■■□□□ 1.68
TRIM43BA6NCK2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM43BA6NCK2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
TRIM43BA6NCK2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM43BA6NCK2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.55■■□□□ 1.68
TRIM43BA6NCK2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.55■■□□□ 1.68
TRIM43BA6NCK2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.55■■□□□ 1.68
TRIM43BA6NCK2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.55■■□□□ 1.68
TRIM43BA6NCK2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.55■■□□□ 1.68
TRIM43BA6NCK2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TRIM43BA6NCK2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TRIM43BA6NCK2 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.54■■□□□ 1.68
TRIM43BA6NCK2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.54■■□□□ 1.68
TRIM43BA6NCK2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.54■■□□□ 1.68
TRIM43BA6NCK2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
TRIM43BA6NCK2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM43BA6NCK2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM43BA6NCK2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM43BA6NCK2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.53■■□□□ 1.68
TRIM43BA6NCK2 AC022517.1-201ENST00000592429 346 ntBASIC25.53■■□□□ 1.68
TRIM43BA6NCK2 AC011298.3-201ENST00000615796 283 ntBASIC25.53■■□□□ 1.68
TRIM43BA6NCK2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
TRIM43BA6NCK2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM43BA6NCK2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
TRIM43BA6NCK2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM43BA6NCK2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM43BA6NCK2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TRIM43BA6NCK2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.52■■□□□ 1.68
TRIM43BA6NCK2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TRIM43BA6NCK2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.52■■□□□ 1.68
TRIM43BA6NCK2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TRIM43BA6NCK2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.52■■□□□ 1.68
TRIM43BA6NCK2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.52■■□□□ 1.68
TRIM43BA6NCK2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TRIM43BA6NCK2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms