Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 ECEL1P1-201ENST00000373592 1742 ntBASIC17.38■□□□□ 0.37
SMIM27A0A1W2PRY6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM27A0A1W2PRY6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.38■□□□□ 0.37
SMIM27A0A1W2PRY6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM27A0A1W2PRY6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM27A0A1W2PRY6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM27A0A1W2PRY6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM27A0A1W2PRY6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM27A0A1W2PRY6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.38■□□□□ 0.37
SMIM27A0A1W2PRY6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM27A0A1W2PRY6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM27A0A1W2PRY6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 AC097358.2-201ENST00000607541 1159 ntBASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 HLA-L-211ENST00000482052 1765 ntBASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.37■□□□□ 0.37
SMIM27A0A1W2PRY6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM27A0A1W2PRY6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM27A0A1W2PRY6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM27A0A1W2PRY6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SMIM27A0A1W2PRY6 AC007375.3-201ENST00000600936 2314 ntBASIC17.36■□□□□ 0.37
SMIM27A0A1W2PRY6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM27A0A1W2PRY6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SMIM27A0A1W2PRY6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM27A0A1W2PRY6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM27A0A1W2PRY6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM27A0A1W2PRY6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SMIM27A0A1W2PRY6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM27A0A1W2PRY6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.35■□□□□ 0.37
SMIM27A0A1W2PRY6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.35■□□□□ 0.37
SMIM27A0A1W2PRY6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM27A0A1W2PRY6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM27A0A1W2PRY6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM27A0A1W2PRY6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM27A0A1W2PRY6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM27A0A1W2PRY6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.34■□□□□ 0.37
SMIM27A0A1W2PRY6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM27A0A1W2PRY6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.34■□□□□ 0.37
SMIM27A0A1W2PRY6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM27A0A1W2PRY6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM27A0A1W2PRY6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM27A0A1W2PRY6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM27A0A1W2PRY6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM27A0A1W2PRY6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM27A0A1W2PRY6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM27A0A1W2PRY6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM27A0A1W2PRY6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM27A0A1W2PRY6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM27A0A1W2PRY6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17.34■□□□□ 0.37
SMIM27A0A1W2PRY6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM27A0A1W2PRY6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM27A0A1W2PRY6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMIM27A0A1W2PRY6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SMIM27A0A1W2PRY6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMIM27A0A1W2PRY6 DUSP8P3-201ENST00000399571 1760 ntBASIC17.33■□□□□ 0.37
SMIM27A0A1W2PRY6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.33■□□□□ 0.36
SMIM27A0A1W2PRY6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMIM27A0A1W2PRY6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SMIM27A0A1W2PRY6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SMIM27A0A1W2PRY6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.32■□□□□ 0.36
SMIM27A0A1W2PRY6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM27A0A1W2PRY6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SMIM27A0A1W2PRY6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM27A0A1W2PRY6 FOXO3B-201ENST00000395675 1928 ntBASIC17.32■□□□□ 0.36
SMIM27A0A1W2PRY6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC17.32■□□□□ 0.36
SMIM27A0A1W2PRY6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM27A0A1W2PRY6 ANOS2P-203ENST00000472227 1816 ntBASIC17.32■□□□□ 0.36
SMIM27A0A1W2PRY6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM27A0A1W2PRY6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM27A0A1W2PRY6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM27A0A1W2PRY6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM27A0A1W2PRY6 HNRNPLP2-201ENST00000568980 1570 ntBASIC17.32■□□□□ 0.36
SMIM27A0A1W2PRY6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.32■□□□□ 0.36
SMIM27A0A1W2PRY6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM27A0A1W2PRY6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM27A0A1W2PRY6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM27A0A1W2PRY6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM27A0A1W2PRY6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.31■□□□□ 0.36
SMIM27A0A1W2PRY6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM27A0A1W2PRY6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.31■□□□□ 0.36
SMIM27A0A1W2PRY6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM27A0A1W2PRY6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM27A0A1W2PRY6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM27A0A1W2PRY6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.3■□□□□ 0.36
SMIM27A0A1W2PRY6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM27A0A1W2PRY6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SMIM27A0A1W2PRY6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms