Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-4A0A1B0GX49 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBV6-4A0A1B0GX49 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRBV6-4A0A1B0GX49 AC011551.1-201ENST00000614101 683 ntBASIC16.36■□□□□ 0.21
TRBV6-4A0A1B0GX49 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRBV6-4A0A1B0GX49 AC074183.2-201ENST00000623112 922 ntBASIC16.36■□□□□ 0.21
TRBV6-4A0A1B0GX49 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV6-4A0A1B0GX49 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.35■□□□□ 0.21
TRBV6-4A0A1B0GX49 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV6-4A0A1B0GX49 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRBV6-4A0A1B0GX49 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-4A0A1B0GX49 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-4A0A1B0GX49 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-4A0A1B0GX49 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-4A0A1B0GX49 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV6-4A0A1B0GX49 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-4A0A1B0GX49 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV6-4A0A1B0GX49 AL161729.1-201ENST00000604104 1402 ntBASIC16.35■□□□□ 0.21
TRBV6-4A0A1B0GX49 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-4A0A1B0GX49 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-4A0A1B0GX49 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-4A0A1B0GX49 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-4A0A1B0GX49 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-4A0A1B0GX49 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV6-4A0A1B0GX49 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV6-4A0A1B0GX49 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-4A0A1B0GX49 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-4A0A1B0GX49 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-4A0A1B0GX49 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-4A0A1B0GX49 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-4A0A1B0GX49 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.33■□□□□ 0.21
TRBV6-4A0A1B0GX49 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
TRBV6-4A0A1B0GX49 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV6-4A0A1B0GX49 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV6-4A0A1B0GX49 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TRBV6-4A0A1B0GX49 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
TRBV6-4A0A1B0GX49 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-4A0A1B0GX49 DUX4L18-201ENST00000553347 1267 ntBASIC16.33■□□□□ 0.2
TRBV6-4A0A1B0GX49 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-4A0A1B0GX49 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.33■□□□□ 0.2
TRBV6-4A0A1B0GX49 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.33■□□□□ 0.2
TRBV6-4A0A1B0GX49 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-4A0A1B0GX49 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-4A0A1B0GX49 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-4A0A1B0GX49 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
TRBV6-4A0A1B0GX49 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV6-4A0A1B0GX49 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-4A0A1B0GX49 AC004812.2-201ENST00000611079 2094 ntBASIC16.33■□□□□ 0.2
TRBV6-4A0A1B0GX49 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-4A0A1B0GX49 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBV6-4A0A1B0GX49 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-4A0A1B0GX49 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-4A0A1B0GX49 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-4A0A1B0GX49 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-4A0A1B0GX49 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-4A0A1B0GX49 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV6-4A0A1B0GX49 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRBV6-4A0A1B0GX49 ATP5G2P3-201ENST00000429083 425 ntBASIC16.32■□□□□ 0.2
TRBV6-4A0A1B0GX49 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV6-4A0A1B0GX49 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-4A0A1B0GX49 BHLHE23-202ENST00000612929 1109 ntBASIC16.32■□□□□ 0.2
TRBV6-4A0A1B0GX49 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRBV6-4A0A1B0GX49 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-4A0A1B0GX49 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRBV6-4A0A1B0GX49 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-4A0A1B0GX49 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-4A0A1B0GX49 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-4A0A1B0GX49 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRBV6-4A0A1B0GX49 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-4A0A1B0GX49 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-4A0A1B0GX49 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-4A0A1B0GX49 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-4A0A1B0GX49 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-4A0A1B0GX49 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRBV6-4A0A1B0GX49 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-4A0A1B0GX49 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-4A0A1B0GX49 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-4A0A1B0GX49 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV6-4A0A1B0GX49 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-4A0A1B0GX49 AC004987.1-201ENST00000428627 508 ntBASIC16.3■□□□□ 0.2
TRBV6-4A0A1B0GX49 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRBV6-4A0A1B0GX49 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-4A0A1B0GX49 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV6-4A0A1B0GX49 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-4A0A1B0GX49 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-4A0A1B0GX49 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRBV6-4A0A1B0GX49 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-4A0A1B0GX49 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-4A0A1B0GX49 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-4A0A1B0GX49 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-4A0A1B0GX49 TSPY13P-201ENST00000338964 914 ntBASIC16.29■□□□□ 0.2
TRBV6-4A0A1B0GX49 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.29■□□□□ 0.2
TRBV6-4A0A1B0GX49 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRBV6-4A0A1B0GX49 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-4A0A1B0GX49 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-4A0A1B0GX49 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-4A0A1B0GX49 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-4A0A1B0GX49 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV6-4A0A1B0GX49 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms