Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
TRAV19A0A0A6YYK7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.19■■□□□ 1.46
TRAV19A0A0A6YYK7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRAV19A0A0A6YYK7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
TRAV19A0A0A6YYK7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRAV19A0A0A6YYK7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRAV19A0A0A6YYK7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
TRAV19A0A0A6YYK7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.18■■□□□ 1.46
TRAV19A0A0A6YYK7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.18■■□□□ 1.46
TRAV19A0A0A6YYK7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
TRAV19A0A0A6YYK7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRAV19A0A0A6YYK7 AC091060.1-201ENST00000623524 1766 ntBASIC24.18■■□□□ 1.46
TRAV19A0A0A6YYK7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRAV19A0A0A6YYK7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.17■■□□□ 1.46
TRAV19A0A0A6YYK7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
TRAV19A0A0A6YYK7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
TRAV19A0A0A6YYK7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRAV19A0A0A6YYK7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.17■■□□□ 1.46
TRAV19A0A0A6YYK7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
TRAV19A0A0A6YYK7 SLC6A10P-202ENST00000431994 2058 ntBASIC24.17■■□□□ 1.46
TRAV19A0A0A6YYK7 AC145676.1-201ENST00000514988 2004 ntBASIC24.17■■□□□ 1.46
TRAV19A0A0A6YYK7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TRAV19A0A0A6YYK7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRAV19A0A0A6YYK7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
TRAV19A0A0A6YYK7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TRAV19A0A0A6YYK7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TRAV19A0A0A6YYK7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.16■■□□□ 1.46
TRAV19A0A0A6YYK7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
TRAV19A0A0A6YYK7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.16■■□□□ 1.46
TRAV19A0A0A6YYK7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.15■■□□□ 1.46
TRAV19A0A0A6YYK7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.15■■□□□ 1.46
TRAV19A0A0A6YYK7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.15■■□□□ 1.46
TRAV19A0A0A6YYK7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRAV19A0A0A6YYK7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
TRAV19A0A0A6YYK7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.15■■□□□ 1.46
TRAV19A0A0A6YYK7 MIR4466-201ENST00000606121 54 ntBASIC24.15■■□□□ 1.46
TRAV19A0A0A6YYK7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRAV19A0A0A6YYK7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.15■■□□□ 1.46
TRAV19A0A0A6YYK7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TRAV19A0A0A6YYK7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.14■■□□□ 1.45
TRAV19A0A0A6YYK7 AC004448.1-201ENST00000458332 883 ntBASIC24.14■■□□□ 1.45
TRAV19A0A0A6YYK7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.14■■□□□ 1.45
TRAV19A0A0A6YYK7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.14■■□□□ 1.45
TRAV19A0A0A6YYK7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.14■■□□□ 1.45
TRAV19A0A0A6YYK7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRAV19A0A0A6YYK7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRAV19A0A0A6YYK7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.13■■□□□ 1.45
TRAV19A0A0A6YYK7 AL512631.2-201ENST00000604634 923 ntBASIC24.13■■□□□ 1.45
TRAV19A0A0A6YYK7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRAV19A0A0A6YYK7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRAV19A0A0A6YYK7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.13■■□□□ 1.45
TRAV19A0A0A6YYK7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.12■■□□□ 1.45
TRAV19A0A0A6YYK7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRAV19A0A0A6YYK7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.12■■□□□ 1.45
TRAV19A0A0A6YYK7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.12■■□□□ 1.45
TRAV19A0A0A6YYK7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.12■■□□□ 1.45
TRAV19A0A0A6YYK7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.12■■□□□ 1.45
TRAV19A0A0A6YYK7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRAV19A0A0A6YYK7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRAV19A0A0A6YYK7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRAV19A0A0A6YYK7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.11■■□□□ 1.45
TRAV19A0A0A6YYK7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TRAV19A0A0A6YYK7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.11■■□□□ 1.45
TRAV19A0A0A6YYK7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TRAV19A0A0A6YYK7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRAV19A0A0A6YYK7 AL139246.5-201ENST00000606645 996 ntBASIC24.11■■□□□ 1.45
TRAV19A0A0A6YYK7 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.11■■□□□ 1.45
TRAV19A0A0A6YYK7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.11■■□□□ 1.45
TRAV19A0A0A6YYK7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.11■■□□□ 1.45
TRAV19A0A0A6YYK7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.11■■□□□ 1.45
TRAV19A0A0A6YYK7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.11■■□□□ 1.45
TRAV19A0A0A6YYK7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRAV19A0A0A6YYK7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
TRAV19A0A0A6YYK7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRAV19A0A0A6YYK7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
TRAV19A0A0A6YYK7 MIR6089-201ENST00000616698 64 ntBASIC24.1■■□□□ 1.45
TRAV19A0A0A6YYK7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
TRAV19A0A0A6YYK7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.1■■□□□ 1.45
TRAV19A0A0A6YYK7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRAV19A0A0A6YYK7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.09■■□□□ 1.45
TRAV19A0A0A6YYK7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.09■■□□□ 1.45
TRAV19A0A0A6YYK7 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.09■■□□□ 1.45
TRAV19A0A0A6YYK7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRAV19A0A0A6YYK7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRAV19A0A0A6YYK7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRAV19A0A0A6YYK7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TRAV19A0A0A6YYK7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TRAV19A0A0A6YYK7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRAV19A0A0A6YYK7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TRAV19A0A0A6YYK7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRAV19A0A0A6YYK7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.07■■□□□ 1.44
TRAV19A0A0A6YYK7 MIR638-201ENST00000385237 100 ntBASIC24.07■■□□□ 1.44
TRAV19A0A0A6YYK7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRAV19A0A0A6YYK7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.07■■□□□ 1.44
TRAV19A0A0A6YYK7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRAV19A0A0A6YYK7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRAV19A0A0A6YYK7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.07■■□□□ 1.44
TRAV19A0A0A6YYK7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.06■■□□□ 1.44
TRAV19A0A0A6YYK7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TRAV19A0A0A6YYK7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 945 ms