Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TRAV6A0A075B6T7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TRAV6A0A075B6T7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAV6A0A075B6T7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV6A0A075B6T7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV6A0A075B6T7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRAV6A0A075B6T7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV6A0A075B6T7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV6A0A075B6T7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TRAV6A0A075B6T7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV6A0A075B6T7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRAV6A0A075B6T7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV6A0A075B6T7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAV6A0A075B6T7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.83■□□□□ 0.77
TRAV6A0A075B6T7 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.83■□□□□ 0.77
TRAV6A0A075B6T7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.83■□□□□ 0.76
TRAV6A0A075B6T7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV6A0A075B6T7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV6A0A075B6T7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV6A0A075B6T7 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.83■□□□□ 0.76
TRAV6A0A075B6T7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV6A0A075B6T7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRAV6A0A075B6T7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TRAV6A0A075B6T7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV6A0A075B6T7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV6A0A075B6T7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRAV6A0A075B6T7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV6A0A075B6T7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV6A0A075B6T7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRAV6A0A075B6T7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV6A0A075B6T7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV6A0A075B6T7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAV6A0A075B6T7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV6A0A075B6T7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV6A0A075B6T7 LINC00526-201ENST00000581067 1875 ntBASIC19.82■□□□□ 0.76
TRAV6A0A075B6T7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAV6A0A075B6T7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV6A0A075B6T7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV6A0A075B6T7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV6A0A075B6T7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
TRAV6A0A075B6T7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAV6A0A075B6T7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAV6A0A075B6T7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TRAV6A0A075B6T7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV6A0A075B6T7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAV6A0A075B6T7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV6A0A075B6T7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV6A0A075B6T7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TRAV6A0A075B6T7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV6A0A075B6T7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV6A0A075B6T7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV6A0A075B6T7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV6A0A075B6T7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRAV6A0A075B6T7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV6A0A075B6T7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV6A0A075B6T7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRAV6A0A075B6T7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV6A0A075B6T7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV6A0A075B6T7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV6A0A075B6T7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRAV6A0A075B6T7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV6A0A075B6T7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV6A0A075B6T7 AC137767.1-201ENST00000602918 1920 ntBASIC19.79■□□□□ 0.76
TRAV6A0A075B6T7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRAV6A0A075B6T7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV6A0A075B6T7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.79■□□□□ 0.76
TRAV6A0A075B6T7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
TRAV6A0A075B6T7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV6A0A075B6T7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAV6A0A075B6T7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV6A0A075B6T7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV6A0A075B6T7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV6A0A075B6T7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV6A0A075B6T7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
TRAV6A0A075B6T7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV6A0A075B6T7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV6A0A075B6T7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV6A0A075B6T7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV6A0A075B6T7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV6A0A075B6T7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV6A0A075B6T7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV6A0A075B6T7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV6A0A075B6T7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAV6A0A075B6T7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV6A0A075B6T7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAV6A0A075B6T7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV6A0A075B6T7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV6A0A075B6T7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV6A0A075B6T7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV6A0A075B6T7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV6A0A075B6T7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV6A0A075B6T7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV6A0A075B6T7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV6A0A075B6T7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV6A0A075B6T7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV6A0A075B6T7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAV6A0A075B6T7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV6A0A075B6T7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV6A0A075B6T7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV6A0A075B6T7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms