Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 YBX1P6-201ENST00000442962 1002 ntBASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 FAM8A2P-201ENST00000528813 1142 ntBASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 AP005019.2-201ENST00000615104 511 ntBASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 LINC00554-201ENST00000564841 3011 ntBASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.22■□□□□ 0.03
CSNK1G3Q9Y6M4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 MIR1908-201ENST00000410394 80 ntBASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 AC106760.1-201ENST00000508690 800 ntBASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 KRT90P-201ENST00000549264 1064 ntBASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.21■□□□□ 0.03
CSNK1G3Q9Y6M4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.21■□□□□ 0.02
CSNK1G3Q9Y6M4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CSNK1G3Q9Y6M4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.21■□□□□ 0.02
CSNK1G3Q9Y6M4 AC018892.3-201ENST00000623986 2499 ntBASIC15.21■□□□□ 0.02
CSNK1G3Q9Y6M4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
CSNK1G3Q9Y6M4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CSNK1G3Q9Y6M4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CSNK1G3Q9Y6M4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CSNK1G3Q9Y6M4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 MSTO2P-201ENST00000314835 1709 ntBASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 MTHFR-217ENST00000641820 1569 ntBASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 BRWD1P1-201ENST00000401091 371 ntBASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 CNN2P8-201ENST00000421872 913 ntBASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 KRT18P25-201ENST00000508931 1278 ntBASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 MIR4313-201ENST00000580760 101 ntBASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 RN7SL219P-201ENST00000582872 296 ntBASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 MIR6869-201ENST00000619434 62 ntBASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms