Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 AC002347.1-201ENST00000569543 541 ntBASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 AL078644.1-201ENST00000609881 752 ntBASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 AC104109.2-201ENST00000602919 1418 ntBASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 ACE3P-201ENST00000423435 1973 ntBASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 UPF3AP3-201ENST00000420996 769 ntBASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 MED15P5-201ENST00000423150 992 ntBASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 HNRNPDP1-201ENST00000439535 754 ntBASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 AC027796.2-201ENST00000575326 344 ntBASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 AL009183.1-201ENST00000603760 355 ntBASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 AC027601.4-201ENST00000611259 610 ntBASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 AC138969.2-201ENST00000532739 9932 ntBASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHGB1Q9Y5G3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGB1Q9Y5G3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms