Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 RNMTL1P1-201ENST00000454103 560 ntBASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 AC141586.1-203ENST00000567242 366 ntBASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 CYP51A1P3-201ENST00000400072 1428 ntBASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC18.6■□□□□ 0.57
ZC3H4Q9UPT8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 AL157792.1-201ENST00000488281 530 ntBASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 AC090857.1-201ENST00000527400 390 ntBASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZC3H4Q9UPT8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 AL596257.1-201ENST00000641463 2694 ntBASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 RN7SKP214-201ENST00000364208 315 ntBASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 AC090164.2-201ENST00000611487 516 ntBASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 CDK7-214ENST00000626796 358 ntTSL 5 BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC18.58■□□□□ 0.57
ZC3H4Q9UPT8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 LINC02199-201ENST00000506655 2702 ntBASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZC3H4Q9UPT8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms