Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB8Q9UN66 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB8Q9UN66 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB8Q9UN66 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB8Q9UN66 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 AC005229.1-201ENST00000392885 409 ntBASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 BAATP1-201ENST00000412284 1225 ntBASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 AC007274.1-201ENST00000439805 662 ntBASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 AC093433.1-201ENST00000458048 571 ntBASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 AC138907.10-201ENST00000623708 983 ntBASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB8Q9UN66 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 TPTE2P1-204ENST00000435256 593 ntBASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 AC012441.1-201ENST00000446669 685 ntBASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 RNU6-751P-201ENST00000516382 101 ntBASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 SNX29P1-201ENST00000548357 1007 ntBASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 AC068620.4-201ENST00000636730 1182 ntBASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 PKD1P5-201ENST00000532415 10291 ntBASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHB8Q9UN66 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms