Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RNA5SP406-201ENST00000516106 112 ntBASIC23.7■■□□□ 1.39
RIMBP3Q9UFD9 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC23.7■■□□□ 1.39
RIMBP3Q9UFD9 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC23.7■■□□□ 1.39
RIMBP3Q9UFD9 EEF1DP7-201ENST00000580496 513 ntBASIC23.7■■□□□ 1.39
RIMBP3Q9UFD9 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC23.7■■□□□ 1.39
RIMBP3Q9UFD9 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC23.7■■□□□ 1.39
RIMBP3Q9UFD9 AL357143.1-203ENST00000639750 881 ntBASIC23.7■■□□□ 1.39
RIMBP3Q9UFD9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 NAT9-219ENST00000582524 573 ntTSL 4 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC23.7■■□□□ 1.38
RIMBP3Q9UFD9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 HNRNPA1P25-201ENST00000422644 937 ntBASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 RBPMSLP-201ENST00000433427 502 ntBASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 CICP12-201ENST00000455801 843 ntBASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 MIR4254-201ENST00000581063 76 ntBASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 AC006116.2-201ENST00000589958 988 ntBASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 AL591424.3-201ENST00000614278 872 ntBASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 RARS-210ENST00000626454 177 ntTSL 5 BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC23.69■■□□□ 1.38
RIMBP3Q9UFD9 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 PYY2-201ENST00000315776 282 ntBASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 CFL1P6-201ENST00000400899 494 ntBASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 AC006328.1-201ENST00000437571 379 ntBASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 RHEB-207ENST00000496004 744 ntTSL 2 BASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 AC021321.1-201ENST00000607397 1113 ntBASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 AC079331.1-201ENST00000623200 1200 ntBASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC23.68■■□□□ 1.38
RIMBP3Q9UFD9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
RIMBP3Q9UFD9 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RIMBP3Q9UFD9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RIMBP3Q9UFD9 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RIMBP3Q9UFD9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RIMBP3Q9UFD9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RIMBP3Q9UFD9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RIMBP3Q9UFD9 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
RIMBP3Q9UFD9 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC23.67■■□□□ 1.38
RIMBP3Q9UFD9 AC136604.1-202ENST00000425471 771 ntBASIC23.67■■□□□ 1.38
RIMBP3Q9UFD9 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RIMBP3Q9UFD9 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC23.67■■□□□ 1.38
RIMBP3Q9UFD9 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC23.67■■□□□ 1.38
RIMBP3Q9UFD9 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RIMBP3Q9UFD9 RPS23-207ENST00000511844 530 ntTSL 2 BASIC23.67■■□□□ 1.38
RIMBP3Q9UFD9 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC23.67■■□□□ 1.38
RIMBP3Q9UFD9 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms