Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 AC092364.2-201ENST00000596710 2692 ntBASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 AC008677.1-201ENST00000519230 1561 ntBASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 CD81-202ENST00000381036 880 ntTSL 3 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 LBH-203ENST00000404397 543 ntTSL 4 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 METTL21AP1-201ENST00000438852 635 ntBASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 AL158211.3-201ENST00000607385 239 ntBASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 Z92544.3-201ENST00000624747 417 ntBASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 FO538757.1-201ENST00000623083 1397 ntBASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 AC069224.1-201ENST00000566372 1715 ntBASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 CNTNAP3P2-201ENST00000617175 3861 ntBASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 LINC02447-202ENST00000501888 2146 ntBASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00474Q9P2X8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 AP003680.1-201ENST00000598970 3660 ntBASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC10.23□□□□□ -0.77
LINC00474Q9P2X8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms