Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 POM121L8P-201ENST00000417732 1281 ntBASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 POM121L9P-203ENST00000441984 1285 ntBASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 RN7SL713P-201ENST00000582127 302 ntBASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC10Q9NYD6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 SLC25A24P2-201ENST00000415059 510 ntBASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 FNTAP2-201ENST00000430308 634 ntBASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 HSPB1P2-201ENST00000448722 546 ntBASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 BX284668.4-201ENST00000453917 508 ntBASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 SCARNA20.5-201ENST00000516991 142 ntBASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 AC126915.1-201ENST00000522847 1038 ntBASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 AC020914.3-201ENST00000594712 304 ntBASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXC10Q9NYD6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 ZACNP1-201ENST00000612259 710 ntBASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXC10Q9NYD6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HOXC10Q9NYD6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC10Q9NYD6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HOXC10Q9NYD6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
HOXC10Q9NYD6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.6■□□□□ 0.41
HOXC10Q9NYD6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC10Q9NYD6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
HOXC10Q9NYD6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms