Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 SAMD11P1-201ENST00000571429 661 ntBASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 AC093726.1-201ENST00000608064 963 ntBASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
BLOC1S4Q9NUP1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
BLOC1S4Q9NUP1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
BLOC1S4Q9NUP1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 AC123567.1-201ENST00000548294 1261 ntBASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 ACE3P-201ENST00000423435 1973 ntBASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 AC093525.8-201ENST00000624099 1342 ntBASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.2■□□□□ 0.34
BLOC1S4Q9NUP1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 AC007787.1-201ENST00000588095 1583 ntBASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 AL391825.1-201ENST00000457671 1364 ntBASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
BLOC1S4Q9NUP1 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms