Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC008494.3-201ENST00000606615 944 ntBASIC16.54■□□□□ 0.24
CISHQ9NSE2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.54■□□□□ 0.24
CISHQ9NSE2 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.54■□□□□ 0.24
CISHQ9NSE2 AL645728.2-202ENST00000641679 227 ntBASIC16.54■□□□□ 0.24
CISHQ9NSE2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CISHQ9NSE2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CISHQ9NSE2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CISHQ9NSE2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CISHQ9NSE2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
CISHQ9NSE2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.54■□□□□ 0.24
CISHQ9NSE2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CISHQ9NSE2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.54■□□□□ 0.24
CISHQ9NSE2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CISHQ9NSE2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.54■□□□□ 0.24
CISHQ9NSE2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CISHQ9NSE2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CISHQ9NSE2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CISHQ9NSE2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CISHQ9NSE2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CISHQ9NSE2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CISHQ9NSE2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CISHQ9NSE2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CISHQ9NSE2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CISHQ9NSE2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CISHQ9NSE2 CRB3P1-201ENST00000449338 276 ntBASIC16.53■□□□□ 0.24
CISHQ9NSE2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 RPL13AP25-201ENST00000484130 612 ntBASIC16.53■□□□□ 0.24
CISHQ9NSE2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 AC092552.1-201ENST00000547243 906 ntBASIC16.53■□□□□ 0.24
CISHQ9NSE2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 AC140912.1-201ENST00000577171 1054 ntBASIC16.53■□□□□ 0.24
CISHQ9NSE2 MIR3197-201ENST00000582241 73 ntBASIC16.53■□□□□ 0.24
CISHQ9NSE2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CISHQ9NSE2 AC091951.1-201ENST00000512854 2465 ntBASIC16.53■□□□□ 0.24
CISHQ9NSE2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CISHQ9NSE2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
CISHQ9NSE2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CISHQ9NSE2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CISHQ9NSE2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CISHQ9NSE2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CISHQ9NSE2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CISHQ9NSE2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CISHQ9NSE2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CISHQ9NSE2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.52■□□□□ 0.24
CISHQ9NSE2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CISHQ9NSE2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CISHQ9NSE2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CISHQ9NSE2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.52■□□□□ 0.24
CISHQ9NSE2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.52■□□□□ 0.24
CISHQ9NSE2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CISHQ9NSE2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
CISHQ9NSE2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CISHQ9NSE2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CISHQ9NSE2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CISHQ9NSE2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CISHQ9NSE2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CISHQ9NSE2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CISHQ9NSE2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.52■□□□□ 0.24
CISHQ9NSE2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.52■□□□□ 0.24
CISHQ9NSE2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.52■□□□□ 0.24
CISHQ9NSE2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.52■□□□□ 0.24
CISHQ9NSE2 ELK1P1-201ENST00000485699 580 ntBASIC16.52■□□□□ 0.24
CISHQ9NSE2 TP53TG3HP-202ENST00000569755 579 ntBASIC16.52■□□□□ 0.24
CISHQ9NSE2 SPDYE22P-201ENST00000582158 798 ntBASIC16.52■□□□□ 0.24
CISHQ9NSE2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.52■□□□□ 0.24
CISHQ9NSE2 TMEM261P1-201ENST00000604899 340 ntBASIC16.52■□□□□ 0.24
CISHQ9NSE2 AC107373.2-201ENST00000607735 490 ntBASIC16.52■□□□□ 0.24
CISHQ9NSE2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.52■□□□□ 0.24
CISHQ9NSE2 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CISHQ9NSE2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CISHQ9NSE2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CISHQ9NSE2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.52■□□□□ 0.23
CISHQ9NSE2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CISHQ9NSE2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CISHQ9NSE2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CISHQ9NSE2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.52■□□□□ 0.23
CISHQ9NSE2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.52■□□□□ 0.23
CISHQ9NSE2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CISHQ9NSE2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CISHQ9NSE2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms