Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.22■□□□□ 0.35
VTA1Q9NP79 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 PPY2P-201ENST00000582808 702 ntBASIC17.22■□□□□ 0.35
VTA1Q9NP79 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
VTA1Q9NP79 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VTA1Q9NP79 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.21■□□□□ 0.35
VTA1Q9NP79 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 AC020914.3-201ENST00000594712 304 ntBASIC17.21■□□□□ 0.35
VTA1Q9NP79 OR10B1P-201ENST00000601666 907 ntBASIC17.21■□□□□ 0.35
VTA1Q9NP79 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 ZACNP1-201ENST00000612259 710 ntBASIC17.21■□□□□ 0.35
VTA1Q9NP79 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
VTA1Q9NP79 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VTA1Q9NP79 AC018735.1-201ENST00000437208 1502 ntBASIC17.21■□□□□ 0.34
VTA1Q9NP79 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
VTA1Q9NP79 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
VTA1Q9NP79 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
VTA1Q9NP79 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
VTA1Q9NP79 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.21■□□□□ 0.34
VTA1Q9NP79 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.21■□□□□ 0.34
VTA1Q9NP79 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VTA1Q9NP79 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
VTA1Q9NP79 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms