Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 BOLA2P3-201ENST00000404566 256 ntBASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 ZNF767P-206ENST00000513792 565 ntBASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 AL583810.1-201ENST00000553344 1045 ntBASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 AC091951.1-201ENST00000512854 2465 ntBASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 POM121L8P-201ENST00000417732 1281 ntBASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 POM121L9P-203ENST00000441984 1285 ntBASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 AC078819.1-201ENST00000547454 765 ntBASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 AC012085.1-201ENST00000548270 765 ntBASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KIAA1549Q9HCM3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 REXO1L2P-201ENST00000425429 2069 ntBASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 FAM21FP-201ENST00000426241 1131 ntBASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 DUX4L45-201ENST00000566406 1057 ntBASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 RN7SL560P-201ENST00000577943 264 ntBASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 MIR6799-201ENST00000620297 69 ntBASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 GPR182-203ENST00000622922 591 ntBASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KIAA1549Q9HCM3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms