Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.05■□□□□ 0.48
SH2D4AQ9H788 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 CNN2P8-201ENST00000421872 913 ntBASIC18.05■□□□□ 0.48
SH2D4AQ9H788 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 PAUPAR-201ENST00000630360 2965 ntBASIC18.05■□□□□ 0.48
SH2D4AQ9H788 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 FAM86MP-201ENST00000340703 885 ntBASIC18.04■□□□□ 0.48
SH2D4AQ9H788 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 AC114812.1-204ENST00000449669 728 ntBASIC18.04■□□□□ 0.48
SH2D4AQ9H788 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 AC023310.1-201ENST00000554836 735 ntBASIC18.04■□□□□ 0.48
SH2D4AQ9H788 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 AC008687.7-202ENST00000637404 953 ntBASIC18.04■□□□□ 0.48
SH2D4AQ9H788 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 AL603832.2-201ENST00000566195 2125 ntBASIC18.04■□□□□ 0.48
SH2D4AQ9H788 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH2D4AQ9H788 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms