Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 PRSS30P-206ENST00000641773 873 ntBASIC16.68■□□□□ 0.26
NXF3Q9H4D5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 AC008741.2-201ENST00000612792 3115 ntBASIC16.68■□□□□ 0.26
NXF3Q9H4D5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 AC092658.1-201ENST00000505836 891 ntBASIC16.67■□□□□ 0.26
NXF3Q9H4D5 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 AC078819.1-201ENST00000547454 765 ntBASIC16.67■□□□□ 0.26
NXF3Q9H4D5 AC012085.1-201ENST00000548270 765 ntBASIC16.67■□□□□ 0.26
NXF3Q9H4D5 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 MIR6799-201ENST00000620297 69 ntBASIC16.67■□□□□ 0.26
NXF3Q9H4D5 AC138951.2-201ENST00000623455 1161 ntBASIC16.67■□□□□ 0.26
NXF3Q9H4D5 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NXF3Q9H4D5 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 AL139094.1-201ENST00000405549 1188 ntBASIC16.66■□□□□ 0.26
NXF3Q9H4D5 NUS1P3-201ENST00000423502 862 ntBASIC16.66■□□□□ 0.26
NXF3Q9H4D5 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 AC114812.1-204ENST00000449669 728 ntBASIC16.66■□□□□ 0.26
NXF3Q9H4D5 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 SAMD11P1-201ENST00000571429 661 ntBASIC16.66■□□□□ 0.26
NXF3Q9H4D5 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NXF3Q9H4D5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms