Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 LINC00552-201ENST00000625151 2579 ntBASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 AL035456.1-201ENST00000456064 1369 ntBASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 AZGP1P1-201ENST00000411909 902 ntBASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 DNAJB3-201ENST00000446806 729 ntBASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 AC105021.1-202ENST00000570572 669 ntBASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 AC022145.2-201ENST00000598203 171 ntBASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 AC105339.1-204ENST00000636249 355 ntBASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 AL607033.1-201ENST00000623900 1599 ntBASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J3Q9H1A7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms