Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 NUS1P3-201ENST00000423502 862 ntBASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 EIF3FP3-201ENST00000434851 1086 ntBASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 AC006453.4-201ENST00000636949 1252 ntBASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 AHCYP2-201ENST00000430630 1300 ntBASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 MIR326-201ENST00000362220 95 ntBASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 FAM86HP-204ENST00000513466 959 ntBASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 AC023310.1-201ENST00000554836 735 ntBASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 LRRC59-203ENST00000576448 1531 ntBASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 KRT8P14-201ENST00000414254 1442 ntBASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 PAUPAR-201ENST00000630360 2965 ntBASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.43■□□□□ 0.22
PAAF1Q9BRP4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 GOLGA2P4-201ENST00000441462 777 ntBASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 ZNF767P-206ENST00000513792 565 ntBASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 FAM8A2P-201ENST00000528813 1142 ntBASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.42■□□□□ 0.22
PAAF1Q9BRP4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms