Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.02■□□□□ 0.8
ABCA3Q99758 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ABCA3Q99758 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
ABCA3Q99758 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC20.02■□□□□ 0.8
ABCA3Q99758 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ABCA3Q99758 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ABCA3Q99758 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.02■□□□□ 0.79
ABCA3Q99758 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC20.02■□□□□ 0.79
ABCA3Q99758 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
ABCA3Q99758 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ABCA3Q99758 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC20.02■□□□□ 0.79
ABCA3Q99758 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC20.02■□□□□ 0.79
ABCA3Q99758 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC20.02■□□□□ 0.79
ABCA3Q99758 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC20.02■□□□□ 0.79
ABCA3Q99758 REEP5-205ENST00000504247 480 ntTSL 5 BASIC20.02■□□□□ 0.79
ABCA3Q99758 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC20.02■□□□□ 0.79
ABCA3Q99758 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
ABCA3Q99758 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC20.02■□□□□ 0.79
ABCA3Q99758 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC20.02■□□□□ 0.79
ABCA3Q99758 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
ABCA3Q99758 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.02■□□□□ 0.79
ABCA3Q99758 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC20.01■□□□□ 0.79
ABCA3Q99758 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
ABCA3Q99758 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCA3Q99758 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC20.01■□□□□ 0.79
ABCA3Q99758 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC20.01■□□□□ 0.79
ABCA3Q99758 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCA3Q99758 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCA3Q99758 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ABCA3Q99758 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCA3Q99758 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCA3Q99758 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC20.01■□□□□ 0.79
ABCA3Q99758 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ABCA3Q99758 XBP1P1-201ENST00000436573 652 ntBASIC20.01■□□□□ 0.79
ABCA3Q99758 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC20.01■□□□□ 0.79
ABCA3Q99758 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ABCA3Q99758 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC20.01■□□□□ 0.79
ABCA3Q99758 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC20.01■□□□□ 0.79
ABCA3Q99758 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCA3Q99758 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCA3Q99758 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCA3Q99758 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC20.01■□□□□ 0.79
ABCA3Q99758 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC20.01■□□□□ 0.79
ABCA3Q99758 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC20■□□□□ 0.79
ABCA3Q99758 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20■□□□□ 0.79
ABCA3Q99758 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC20■□□□□ 0.79
ABCA3Q99758 AL137783.1-201ENST00000623494 1896 ntBASIC20■□□□□ 0.79
ABCA3Q99758 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC20■□□□□ 0.79
ABCA3Q99758 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ABCA3Q99758 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ABCA3Q99758 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ABCA3Q99758 AC006449.5-201ENST00000610658 2098 ntBASIC20■□□□□ 0.79
ABCA3Q99758 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ABCA3Q99758 HIST2H2BA-201ENST00000412169 381 ntBASIC20■□□□□ 0.79
ABCA3Q99758 TLE1P1-201ENST00000422965 589 ntBASIC20■□□□□ 0.79
ABCA3Q99758 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC20■□□□□ 0.79
ABCA3Q99758 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC20■□□□□ 0.79
ABCA3Q99758 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC20■□□□□ 0.79
ABCA3Q99758 CICP12-201ENST00000455801 843 ntBASIC20■□□□□ 0.79
ABCA3Q99758 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC20■□□□□ 0.79
ABCA3Q99758 CCNC-217ENST00000523985 958 ntTSL 2 BASIC20■□□□□ 0.79
ABCA3Q99758 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC20■□□□□ 0.79
ABCA3Q99758 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ABCA3Q99758 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ABCA3Q99758 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20■□□□□ 0.79
ABCA3Q99758 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC20■□□□□ 0.79
ABCA3Q99758 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ABCA3Q99758 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ABCA3Q99758 STK26-204ENST00000481105 1835 ntTSL 2 BASIC20■□□□□ 0.79
ABCA3Q99758 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC20■□□□□ 0.79
ABCA3Q99758 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ABCA3Q99758 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ABCA3Q99758 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ABCA3Q99758 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ABCA3Q99758 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ABCA3Q99758 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC20■□□□□ 0.79
ABCA3Q99758 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20■□□□□ 0.79
ABCA3Q99758 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ABCA3Q99758 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC20■□□□□ 0.79
ABCA3Q99758 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20■□□□□ 0.79
ABCA3Q99758 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ABCA3Q99758 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.99■□□□□ 0.79
ABCA3Q99758 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ABCA3Q99758 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ABCA3Q99758 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC19.99■□□□□ 0.79
ABCA3Q99758 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ABCA3Q99758 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ABCA3Q99758 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC19.99■□□□□ 0.79
ABCA3Q99758 AC008825.2-201ENST00000603374 718 ntBASIC19.99■□□□□ 0.79
ABCA3Q99758 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC19.99■□□□□ 0.79
ABCA3Q99758 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ABCA3Q99758 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
ABCA3Q99758 RAN-210ENST00000541630 1475 ntTSL 2 BASIC19.99■□□□□ 0.79
ABCA3Q99758 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC19.99■□□□□ 0.79
ABCA3Q99758 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ABCA3Q99758 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ABCA3Q99758 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ABCA3Q99758 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
ABCA3Q99758 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ABCA3Q99758 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms