Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH4Q99466 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH4Q99466 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH4Q99466 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH4Q99466 AC010141.1-201ENST00000411585 623 ntBASIC15.69■□□□□ 0.1
NOTCH4Q99466 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.69■□□□□ 0.1
NOTCH4Q99466 AL133499.1-201ENST00000596207 608 ntBASIC15.69■□□□□ 0.1
NOTCH4Q99466 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH4Q99466 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH4Q99466 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NOTCH4Q99466 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH4Q99466 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
NOTCH4Q99466 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.69■□□□□ 0.1
NOTCH4Q99466 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH4Q99466 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH4Q99466 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH4Q99466 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.69■□□□□ 0.1
NOTCH4Q99466 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH4Q99466 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH4Q99466 AL138725.1-201ENST00000407347 1314 ntBASIC15.69■□□□□ 0.1
NOTCH4Q99466 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NOTCH4Q99466 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.69■□□□□ 0.1
NOTCH4Q99466 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.69■□□□□ 0.1
NOTCH4Q99466 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.69■□□□□ 0.1
NOTCH4Q99466 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NOTCH4Q99466 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH4Q99466 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.68■□□□□ 0.1
NOTCH4Q99466 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH4Q99466 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.68■□□□□ 0.1
NOTCH4Q99466 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NOTCH4Q99466 AC090164.2-201ENST00000611487 516 ntBASIC15.68■□□□□ 0.1
NOTCH4Q99466 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH4Q99466 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH4Q99466 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NOTCH4Q99466 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH4Q99466 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH4Q99466 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NOTCH4Q99466 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH4Q99466 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.68■□□□□ 0.1
NOTCH4Q99466 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.68■□□□□ 0.1
NOTCH4Q99466 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH4Q99466 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH4Q99466 AC020916.1-201ENST00000587762 1774 ntBASIC15.68■□□□□ 0.1
NOTCH4Q99466 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NOTCH4Q99466 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NOTCH4Q99466 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
NOTCH4Q99466 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.68■□□□□ 0.1
NOTCH4Q99466 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.68■□□□□ 0.1
NOTCH4Q99466 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NOTCH4Q99466 RN7SL11P-201ENST00000471305 293 ntBASIC15.68■□□□□ 0.1
NOTCH4Q99466 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.68■□□□□ 0.1
NOTCH4Q99466 MIR4722-201ENST00000578292 60 ntBASIC15.68■□□□□ 0.1
NOTCH4Q99466 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.68■□□□□ 0.1
NOTCH4Q99466 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NOTCH4Q99466 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH4Q99466 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH4Q99466 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH4Q99466 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NOTCH4Q99466 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.67■□□□□ 0.1
NOTCH4Q99466 FTLP1-201ENST00000449155 526 ntBASIC15.67■□□□□ 0.1
NOTCH4Q99466 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.67■□□□□ 0.1
NOTCH4Q99466 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 SHC1P1-201ENST00000425230 1745 ntBASIC15.67■□□□□ 0.1
NOTCH4Q99466 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NOTCH4Q99466 MIR33B-201ENST00000385104 96 ntBASIC15.67■□□□□ 0.1
NOTCH4Q99466 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.67■□□□□ 0.1
NOTCH4Q99466 RN7SL720P-201ENST00000488178 304 ntBASIC15.67■□□□□ 0.1
NOTCH4Q99466 AC103988.2-201ENST00000561804 725 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms