Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SNX27Q96L92 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.7■□□□□ 0.26
SNX27Q96L92 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.7■□□□□ 0.26
SNX27Q96L92 MIR6775-201ENST00000617557 69 ntBASIC16.7■□□□□ 0.26
SNX27Q96L92 AL645728.2-202ENST00000641679 227 ntBASIC16.7■□□□□ 0.26
SNX27Q96L92 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SNX27Q96L92 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.7■□□□□ 0.26
SNX27Q96L92 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SNX27Q96L92 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.7■□□□□ 0.26
SNX27Q96L92 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SNX27Q96L92 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.7■□□□□ 0.26
SNX27Q96L92 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.7■□□□□ 0.26
SNX27Q96L92 AC093525.8-201ENST00000624099 1342 ntBASIC16.7■□□□□ 0.26
SNX27Q96L92 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX27Q96L92 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX27Q96L92 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX27Q96L92 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX27Q96L92 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SNX27Q96L92 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX27Q96L92 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.69■□□□□ 0.26
SNX27Q96L92 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX27Q96L92 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNX27Q96L92 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX27Q96L92 ANKRD19P-201ENST00000338192 862 ntBASIC16.69■□□□□ 0.26
SNX27Q96L92 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNX27Q96L92 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.69■□□□□ 0.26
SNX27Q96L92 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.69■□□□□ 0.26
SNX27Q96L92 BRWD1P1-201ENST00000401091 371 ntBASIC16.69■□□□□ 0.26
SNX27Q96L92 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.69■□□□□ 0.26
SNX27Q96L92 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.69■□□□□ 0.26
SNX27Q96L92 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNX27Q96L92 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.69■□□□□ 0.26
SNX27Q96L92 MIR3615-201ENST00000581999 87 ntBASIC16.69■□□□□ 0.26
SNX27Q96L92 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX27Q96L92 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.69■□□□□ 0.26
SNX27Q96L92 AP005019.2-201ENST00000615104 511 ntBASIC16.69■□□□□ 0.26
SNX27Q96L92 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.69■□□□□ 0.26
SNX27Q96L92 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNX27Q96L92 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX27Q96L92 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX27Q96L92 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX27Q96L92 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SNX27Q96L92 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX27Q96L92 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX27Q96L92 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX27Q96L92 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SNX27Q96L92 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX27Q96L92 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX27Q96L92 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNX27Q96L92 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX27Q96L92 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX27Q96L92 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX27Q96L92 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SNX27Q96L92 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.68■□□□□ 0.26
SNX27Q96L92 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.68■□□□□ 0.26
SNX27Q96L92 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.68■□□□□ 0.26
SNX27Q96L92 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.68■□□□□ 0.26
SNX27Q96L92 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.68■□□□□ 0.26
SNX27Q96L92 SLC25A24P2-201ENST00000415059 510 ntBASIC16.68■□□□□ 0.26
SNX27Q96L92 HINT2P1-201ENST00000419438 481 ntBASIC16.68■□□□□ 0.26
SNX27Q96L92 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.68■□□□□ 0.26
SNX27Q96L92 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SNX27Q96L92 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.68■□□□□ 0.26
SNX27Q96L92 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.68■□□□□ 0.26
SNX27Q96L92 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.68■□□□□ 0.26
SNX27Q96L92 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.68■□□□□ 0.26
SNX27Q96L92 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
SNX27Q96L92 PDIA3P1-201ENST00000471856 1510 ntBASIC16.68■□□□□ 0.26
SNX27Q96L92 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.68■□□□□ 0.26
SNX27Q96L92 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SNX27Q96L92 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.68■□□□□ 0.26
SNX27Q96L92 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX27Q96L92 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX27Q96L92 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX27Q96L92 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SNX27Q96L92 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX27Q96L92 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms