Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 CYP4F24P-201ENST00000586049 1580 ntBASIC13.61□□□□□ -0.23
CPNE2Q96FN4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.6□□□□□ -0.23
CPNE2Q96FN4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 RPL5P21-201ENST00000404620 815 ntBASIC13.6□□□□□ -0.23
CPNE2Q96FN4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 FAM58CP-201ENST00000435741 640 ntBASIC13.6□□□□□ -0.23
CPNE2Q96FN4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 AP000842.3-202ENST00000569238 1080 ntBASIC13.6□□□□□ -0.23
CPNE2Q96FN4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 BX640515.1-201ENST00000617215 977 ntBASIC13.6□□□□□ -0.23
CPNE2Q96FN4 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE2Q96FN4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.59□□□□□ -0.23
CPNE2Q96FN4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 AL353705.2-201ENST00000428243 662 ntBASIC13.59□□□□□ -0.23
CPNE2Q96FN4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 AC040169.1-201ENST00000565382 521 ntBASIC13.59□□□□□ -0.23
CPNE2Q96FN4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.59□□□□□ -0.23
CPNE2Q96FN4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms