Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 AC046158.3-201ENST00000624947 2558 ntBASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 RPL5P21-201ENST00000404620 815 ntBASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 AP000812.2-201ENST00000538934 718 ntBASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 RN7SL219P-201ENST00000582872 296 ntBASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0A1Q93050 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP6V0A1Q93050 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.33■□□□□ 0.37
ATP6V0A1Q93050 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.33■□□□□ 0.37
ATP6V0A1Q93050 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP6V0A1Q93050 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP6V0A1Q93050 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATP6V0A1Q93050 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP6V0A1Q93050 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATP6V0A1Q93050 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP6V0A1Q93050 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 FAM21FP-201ENST00000426241 1131 ntBASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 AC016694.1-201ENST00000434179 700 ntBASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 RNA5SP412-201ENST00000516234 123 ntBASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ATP6V0A1Q93050 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms