Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 AC004790.1-201ENST00000612686 536 ntBASIC14.74□□□□□ -0.05
TM9SF4Q92544 AC005702.4-201ENST00000618393 416 ntBASIC14.74□□□□□ -0.05
TM9SF4Q92544 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF4Q92544 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF4Q92544 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF4Q92544 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF4Q92544 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF4Q92544 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 AC023157.3-201ENST00000619086 2088 ntBASIC14.73□□□□□ -0.05
TM9SF4Q92544 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 MIR658-201ENST00000385210 100 ntBASIC14.73□□□□□ -0.05
TM9SF4Q92544 MIR1909-201ENST00000411312 80 ntBASIC14.73□□□□□ -0.05
TM9SF4Q92544 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 RPS2P32-201ENST00000439199 892 ntBASIC14.73□□□□□ -0.05
TM9SF4Q92544 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 AC036164.1-201ENST00000570544 333 ntBASIC14.73□□□□□ -0.05
TM9SF4Q92544 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 AL033527.5-201ENST00000641382 801 ntBASIC14.73□□□□□ -0.05
TM9SF4Q92544 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 SSR4P1-203ENST00000599569 2260 ntBASIC14.73□□□□□ -0.05
TM9SF4Q92544 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TM9SF4Q92544 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TM9SF4Q92544 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TM9SF4Q92544 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TM9SF4Q92544 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TM9SF4Q92544 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TM9SF4Q92544 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TM9SF4Q92544 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TM9SF4Q92544 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TM9SF4Q92544 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TM9SF4Q92544 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TM9SF4Q92544 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TM9SF4Q92544 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TM9SF4Q92544 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TM9SF4Q92544 CLK3P2-201ENST00000427566 1453 ntBASIC14.72□□□□□ -0.05
TM9SF4Q92544 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TM9SF4Q92544 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TM9SF4Q92544 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TM9SF4Q92544 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.72□□□□□ -0.05
TM9SF4Q92544 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TM9SF4Q92544 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.72□□□□□ -0.05
TM9SF4Q92544 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.72□□□□□ -0.05
TM9SF4Q92544 AC112492.5-201ENST00000421897 457 ntBASIC14.72□□□□□ -0.05
TM9SF4Q92544 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.72□□□□□ -0.05
TM9SF4Q92544 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TM9SF4Q92544 AC245100.5-201ENST00000452108 331 ntBASIC14.72□□□□□ -0.05
TM9SF4Q92544 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.72□□□□□ -0.05
TM9SF4Q92544 AC243562.2-201ENST00000561247 970 ntBASIC14.72□□□□□ -0.05
TM9SF4Q92544 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.72□□□□□ -0.05
TM9SF4Q92544 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.72□□□□□ -0.05
TM9SF4Q92544 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.72□□□□□ -0.05
TM9SF4Q92544 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.72□□□□□ -0.05
TM9SF4Q92544 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms