Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 AC104982.3-201ENST00000581995 514 ntBASIC14.37□□□□□ -0.11
CT55Q8WUE5 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 AC084346.2-201ENST00000607097 949 ntBASIC14.37□□□□□ -0.11
CT55Q8WUE5 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 CYP2T1P-202ENST00000641596 2535 ntBASIC14.37□□□□□ -0.11
CT55Q8WUE5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 SAMD11P1-201ENST00000571429 661 ntBASIC14.36□□□□□ -0.11
CT55Q8WUE5 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 AL096828.3-201ENST00000615354 462 ntBASIC14.36□□□□□ -0.11
CT55Q8WUE5 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CT55Q8WUE5 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CT55Q8WUE5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.35□□□□□ -0.11
CT55Q8WUE5 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CT55Q8WUE5 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CT55Q8WUE5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CT55Q8WUE5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
CT55Q8WUE5 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CT55Q8WUE5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CT55Q8WUE5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.35□□□□□ -0.11
CT55Q8WUE5 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CT55Q8WUE5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CT55Q8WUE5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.35□□□□□ -0.11
CT55Q8WUE5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CT55Q8WUE5 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CT55Q8WUE5 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CT55Q8WUE5 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CT55Q8WUE5 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.35□□□□□ -0.11
CT55Q8WUE5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.35□□□□□ -0.11
CT55Q8WUE5 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.35□□□□□ -0.11
CT55Q8WUE5 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.35□□□□□ -0.11
CT55Q8WUE5 EIF3FP3-201ENST00000434851 1086 ntBASIC14.35□□□□□ -0.11
CT55Q8WUE5 FAM8A4P-201ENST00000435433 1213 ntBASIC14.35□□□□□ -0.11
CT55Q8WUE5 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.35□□□□□ -0.11
CT55Q8WUE5 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.35□□□□□ -0.11
CT55Q8WUE5 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.35□□□□□ -0.11
CT55Q8WUE5 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms