Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 AL512384.1-201ENST00000406683 331 ntBASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 RN7SL837P-201ENST00000463010 287 ntBASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 BX539320.1-201ENST00000623759 877 ntBASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 PPT1-215ENST00000641471 2368 ntBASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 PKD1P5-201ENST00000532415 10291 ntBASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAM1L1Q8N609 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 AC148477.4-201ENST00000613430 1793 ntBASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 CICP11-201ENST00000434745 2827 ntBASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 AC068587.6-202ENST00000641839 5619 ntBASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 AC093525.8-201ENST00000624099 1342 ntBASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 AP001582.1-201ENST00000525856 295 ntBASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 AP001063.1-201ENST00000568332 529 ntBASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 CLUHP6-201ENST00000580789 941 ntBASIC15.29■□□□□ 0.04
TRAM1L1Q8N609 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms