Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 COX5BP8-201ENST00000416911 349 ntBASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 KRT18P64-201ENST00000434946 1219 ntBASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 RN7SL399P-201ENST00000471648 279 ntBASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 CR383656.12-201ENST00000549567 513 ntBASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM48Q8IWZ4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 TOMM22P5-201ENST00000416399 439 ntBASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 ELK1P1-201ENST00000485699 580 ntBASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM48Q8IWZ4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 AC024909.3-201ENST00000611513 2257 ntBASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 FAM86LP-201ENST00000478302 853 ntBASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms