Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 AL121723.1-201ENST00000445194 1519 ntBASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 AC243562.2-201ENST00000561247 970 ntBASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 MIR4722-201ENST00000578292 60 ntBASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 AL049840.4-201ENST00000602422 811 ntBASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 AC026471.1-201ENST00000564629 3026 ntBASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 AC097724.1-201ENST00000609581 426 ntBASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.12□□□□□ -0.15
RP1L1Q8IWN7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 AC020914.3-201ENST00000594712 304 ntBASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 AC078925.2-201ENST00000624013 1973 ntBASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 AC015818.8-201ENST00000587907 1519 ntBASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RP1L1Q8IWN7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RP1L1Q8IWN7 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RP1L1Q8IWN7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.1□□□□□ -0.15
RP1L1Q8IWN7 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms