Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ZNF546Q86UE3 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 PEG13-201ENST00000631594 5667 ntBASIC13□□□□□ -0.33
ZNF546Q86UE3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
ZNF546Q86UE3 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13□□□□□ -0.33
ZNF546Q86UE3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 PPT1-213ENST00000641319 2388 ntBASIC13□□□□□ -0.33
ZNF546Q86UE3 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ZNF546Q86UE3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13□□□□□ -0.33
ZNF546Q86UE3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13□□□□□ -0.33
ZNF546Q86UE3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13□□□□□ -0.33
ZNF546Q86UE3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ZNF546Q86UE3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
ZNF546Q86UE3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 RCN1P1-201ENST00000400413 996 ntBASIC13□□□□□ -0.33
ZNF546Q86UE3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13□□□□□ -0.33
ZNF546Q86UE3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13□□□□□ -0.33
ZNF546Q86UE3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13□□□□□ -0.33
ZNF546Q86UE3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13□□□□□ -0.33
ZNF546Q86UE3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
ZNF546Q86UE3 AP002414.4-201ENST00000589764 1148 ntBASIC13□□□□□ -0.33
ZNF546Q86UE3 AC066615.1-201ENST00000640911 628 ntBASIC13□□□□□ -0.33
ZNF546Q86UE3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ZNF546Q86UE3 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ZNF546Q86UE3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13□□□□□ -0.33
ZNF546Q86UE3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
ZNF546Q86UE3 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13□□□□□ -0.33
ZNF546Q86UE3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13□□□□□ -0.33
ZNF546Q86UE3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13□□□□□ -0.33
ZNF546Q86UE3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF546Q86UE3 ACE3P-201ENST00000423435 1973 ntBASIC13□□□□□ -0.33
ZNF546Q86UE3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 AL139424.1-201ENST00000607572 797 ntBASIC12.99□□□□□ -0.33
ZNF546Q86UE3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 AL022326.1-202ENST00000641533 845 ntBASIC12.99□□□□□ -0.33
ZNF546Q86UE3 AF228730.7-201ENST00000641842 219 ntBASIC12.99□□□□□ -0.33
ZNF546Q86UE3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms