Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 AL589987.1-201ENST00000453380 819 ntBASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 AC023310.3-201ENST00000557027 670 ntBASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 AC100756.1-201ENST00000562736 682 ntBASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 AC138749.3-201ENST00000567691 622 ntBASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 AC116165.1-201ENST00000611806 668 ntBASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 AL662799.1-202ENST00000614205 422 ntBASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 AL358472.5-202ENST00000641448 1267 ntBASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TTC39BQ5VTQ0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 API5-211ENST00000534695 560 ntTSL 5 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 AC036164.1-201ENST00000570544 333 ntBASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 AC138035.3-201ENST00000622706 2791 ntBASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TTC39BQ5VTQ0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TTC39BQ5VTQ0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TTC39BQ5VTQ0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TTC39BQ5VTQ0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
TTC39BQ5VTQ0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TTC39BQ5VTQ0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TTC39BQ5VTQ0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TTC39BQ5VTQ0 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.21■□□□□ 0.19
TTC39BQ5VTQ0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TTC39BQ5VTQ0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TTC39BQ5VTQ0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms