Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 AC079316.1-201ENST00000548397 411 ntBASIC16.43■□□□□ 0.22
VARS2Q5ST30 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 AC145423.3-201ENST00000615987 467 ntBASIC16.43■□□□□ 0.22
VARS2Q5ST30 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.43■□□□□ 0.22
VARS2Q5ST30 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VARS2Q5ST30 AL513523.2-202ENST00000427283 2040 ntBASIC16.43■□□□□ 0.22
VARS2Q5ST30 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 RNU1-114P-201ENST00000365297 166 ntBASIC16.42■□□□□ 0.22
VARS2Q5ST30 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 CNN2P8-201ENST00000421872 913 ntBASIC16.42■□□□□ 0.22
VARS2Q5ST30 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 AC103810.3-201ENST00000583567 96 ntBASIC16.42■□□□□ 0.22
VARS2Q5ST30 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VARS2Q5ST30 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.42■□□□□ 0.22
VARS2Q5ST30 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VARS2Q5ST30 AC020907.1-201ENST00000616460 1350 ntBASIC16.41■□□□□ 0.22
VARS2Q5ST30 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VARS2Q5ST30 AL138709.1-201ENST00000614840 1693 ntBASIC16.41■□□□□ 0.22
VARS2Q5ST30 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VARS2Q5ST30 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VARS2Q5ST30 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VARS2Q5ST30 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 KLF2P2-201ENST00000416807 1039 ntBASIC16.41■□□□□ 0.22
VARS2Q5ST30 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 UPF3AP2-201ENST00000457924 1132 ntBASIC16.41■□□□□ 0.22
VARS2Q5ST30 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VARS2Q5ST30 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.41■□□□□ 0.22
VARS2Q5ST30 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms