Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 DUX4L45-201ENST00000566406 1057 ntBASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 AC138951.2-201ENST00000623455 1161 ntBASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 AC132938.4-201ENST00000623835 848 ntBASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 AC046158.3-201ENST00000624947 2558 ntBASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 AC009090.5-201ENST00000624886 2285 ntBASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 PRAL-201ENST00000624952 3286 ntBASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNFT1Q5M7Z0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 AC132872.1-201ENST00000566986 1195 ntBASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 PRSS30P-206ENST00000641773 873 ntBASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 AL513477.1-201ENST00000602865 2407 ntBASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNFT1Q5M7Z0 AC007326.2-201ENST00000624224 7579 ntBASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 ACTBP8-201ENST00000403258 1108 ntBASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 AC114812.1-204ENST00000449669 728 ntBASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms